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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 31-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae JJA
- locus tag: SPJ_1669 [new locus tag: SPJ_RS13090 ]
- pan locus tag?: PNEUPAN003228000
- symbol: SPJ_1669
- pan gene symbol?: —
- synonym:
- product:
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: pseudogene
- locus tag: SPJ_1669 [new locus tag: SPJ_RS13090 ]
- symbol: SPJ_1669
- product:
- replicon: chromosome
- strand: -
- coordinates: 1592944..1601208
- length: 8265
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP000919 (1592944..1601208) NCBI
- BioCyc: see SPJ_RS13090
- MicrobesOnline: 7479923 MicrobesOnline
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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8221TTGTTTAAGGTCTTGCGAGGTGGTGTTGATACTACTCAGGTCATGACCGAAACGGTAGAA
GATAAAGTAAGTCATTCAATTACTGGGCTTGATATCCTCAAGGGGATAGTTGCTGCGGGA
ACTGTCATAAGTGGAACCGTTGCAACTCAAACGAAGGTATTTACAAATGAGTCGGCAGTA
CTTGAAAAAACTGTAGAGAAAACGGATGCTTTGGCAACAAATGATACAGTAGTTCTAGGT
ACGATATCTACAAGTAATTCAGCGAGTTCAACTAGTTTGTCAGCTTCAGAGTCGGCAAGT
ACATCTGCATCTGAGTCAGCCTCAACCAGCGCTTCGACCTCAGCGAGTACAAGTGCATCA
GAATCAGCAAGTACATCGGCTTCGACAAGTATCTCTGCATCATCTACTGTGGTAGGATCA
CAAACAGCTGCCGCTACAGAAGCAACTGCTAAGAAGGTCGAAGAAGATCGTAAGAAACCA
GCTAGTGATTATGTAGCATCAGTTACAAATGTCAATCTCCAATCTTATGCTAAGCGACGC
AAGCGTTCAGTGGATTCCATCGAGCAATTGCTGGCTTCTATAAATGCTGCTGTTTTTTCT
GGCAATACGATTGTAAATGGCGCCCCTGCAATTAATGCAAGTATAAACATTGCTAAAAGT
GAGGAAAAAGTTTATACAGGTGAAGGTGTAGATTCATTTTATAATATTCCAATTTACTAT
CAATTGACAGTGACAAATGATGGTTCAAAATTGACCTTTACCTATACGGTTACGTATGTG
AATCCTACAACAAAGATTCTTGGTAATATATCAAAAAAGATGAGTAATGGATATTCTATC
TATAATACAGGAACAATTTATCAAACGATGTTAACGTTAGGAAAGGGATTGAGAACACCT
TCAAGTGTAAAGAACTACATTACTGACAAAAATGGTAAACAGGTTCAATACTATAATATG
TCTACAATGACGACGCAGGGTAGTGGGTATACTTGGGGAAATGGTGCCCAAATGAATGGT
TGGCAGGCTAAGCAAGGATATGGATTAACATCATCTTGGACTGTATCAATTACTGGAACG
GATACATCCTTTACATTTACCCCTTACGCTGCTAAAACAGATAAAATTAGAACTAACTAC
TTCAATGGTGGAGGAAAGGTAGTTGAATCTAGCACGACCAGTCAGTCACTTTCACAGTCT
AAGTCACTCTCAGTAAGTGCTAGTCAAAGTGCGTCAGCCTCAGCATCAACGAGTGCTTCA
GCCTCAGCAAGTACCAGTGCGTCAGCCTCAGCGTCGACAAGTGCGTCGGCTTCAGCAAGT
ACCTCAGCGTCTGAATCCGCATCAACAAGTGCGTCGGCTTCAGCATCAACGAGTGCATCA
GCTTCAGCATCGACAAGTGCATCTGAATCAGCAAGCACCAGTGCGTCAGCTTCAGCGTCA
ACCAGTGCTTCAGCCTCAGCAAGTACATCAGCTTCTGAATCTGCATCAACAAGCGCCTCA
GCTTCAGCAAGCACAAGTGCTTCAGTCTCAGCGTCAACCAGTGCCTCTGAATCCGCATCA
ACGAGTGCGTCCGCTTCAGCAAGCACAAGTGCCTCAGCCTCAGCAAGTACCAGTGCATCA
GCTTCAGCAAGCACCAGTGCGTCAGCCTCAGCGTCGACAAGTGCGTCGGCTTCAGCAAGT
ACCTCAGCGTCTGAATCAGCATCAACAAGTGCCTCGGCTTCAGCATCAACGAGTGCATCA
GCTTCAGCATCAACAAGTGCCTCGGCTTCAGCAAGCACCAGTGCGTCGGCTTCAGCAAGT
ACTAGCGCCTCAGCCTCAGCCTCAACCAGTGCATCTGAATCGGCATCAACCAGTGCGTCA
GCCTCAGCAAGTACTAGTGCATCAGCTTCAGCATCAACGAGTGCATCGGCTTCAGCGTCA
ACCAGTGCATCAGAGTCAGCAAGTACCAGTGCGTCAGCTTCCGCATCAACAAGTGCATCG
GCTTCAGCAAGCACCAGTGCGTCGGCTTCAGCAAGTACTAGCGCCTCAGCATCAGCGTCA
ACAAGTGCTTCGGCTTCAGCGTCAACGAGTGCGTCTGAGTCAGCATCAACGAGTGCGTCA
GCCTCAGCAAGCACATCAGCTTCTGAATCTGCATCAACCAGTGCGTCAGCCTCAGCATCG
ACAAGCGCCTCAGCTTCAGCAAGTACCAGTGCGTCAGCCTCAGCGTCGACAAGTGCGTCG
GCTTCAGCAAGTACCTCAGCGTCTGAATCAGCGTCAACAAGTGCTTCGGCTTCAGCGTCA
ACGAGTGCGTCTGAGTCAGCATCAACGAGTACGTCAGCCTCAGCAAGCACATCAGCTTCT
GAATCTGCATCAACCAGTGCGTCAGCCTCAGCATCGACAAGCGCCTCAGCTTCAGCAAGT
ACCAGTGCGTCAGCCTCAGCAAGTACCAGTGCGTCAGCCTCAGCGTCGACAAGTGCGTCG
GCCTCAACCAGTGCATCTGAATCGGCCTCAACCAGTGCTTCGGCCTCAGCGTCAACGAGT
GCTTCAGTCTCAGCAAGCACAAGCGCCTCAGCCTCAGCATCAACCAGTGCGTCAGCTTCA
GCATCAACCAGTGCGTCGGCTTCAGCAAGCACAAGCGCCTCAGCTTCAGCAAGCACAAGT
GCTTCAGTCTCAGCAAGTACCAGTGCGTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCA
GCAAGTACCAGTGCTTCAGCTTCCGCATCAACGAGTGCGTCAGCTTCAGCAAGCACAAGT
GCGTCAGCCTCAGCAAGTACCAGTGCATCAGAGTCAGCAAGTACCAGTGCATCAGAGTCA
GCAAGTACCAGTGCATCAGAGTCAGCAAGTACTAGCGCCTCAGCTTCAGCAAGTACTAGT
GCATCAGCTTCAGCAAGCACCAGTGCCTCAGCTTCAGCCTCAGCGTCAACCAGTGCGTCG
GCTTCAGCAAGTACCAGTGCGTCAGCTTCAGCAAGCACAAGTGCGTCAGCTTCAGCGTCA
ACCAGCGCCTCAGCTTCAGCATCAACGAGTGCGTCGGCTTCAGCATCAACGAGTGCATCG
GCTTCAGCGTCAACCAGTGCATCAGAGTCAGCAAGCACCAGTGCGTCGGCTTCAGCAAGT
ACTAGCGCCTCAGCCTCAGCATCAACCAGTGCATCAGCCTCAGCAAGTATCTCAGCGTCT
GAATCAGCCTCAACCAGTGCGTCAGCCTCAGCAAGTATCTCAGCGTCTGAATCGGCATCA
ACGAGTGCGTCGGCTTCAGCAAGTACTAGCGCCTCAGCATCAGCGTCAACAAGTGCATCG
GCTTCAGCGTCAACGAGTGCGTCTGAGTCAGCATCAACGAGTGCGTCAGCCTCAGCAAGC
ACATCAGCTTCTGAATCTGCATCAACCAGTGCGTCAGCCTCAGCATCGACAAGCGCCTCA
GCTTCAGCAAGTACCAGCGCCTCAGCTTCAGCGTCAACCAGTGCATCAGCCTCAGCAAGT
ACCAGTGCTTCGGCTTCAGCAAGTACCAGTGCATCAGCTTCAGCAAGTACCTCAGCGTCT
GAATCGGCATCAACAAGTGCTTCAGCCTCAGCCTCAGCATCAACCAGTGCATCAGCCTCA
GCAAGTATCTCAGCGTCTGAATCAGCCTCAACCAGTGCGTCAGCCTCAGCAAGTATCTCA
GCGTCTGAATCGGCATCAACGAGTGCGTCGGCTTCAGCAAGTACTAGCGCCTCAGCATCA
GCGTCAACAAGTGCTTCGGCTTCAGCGTCAACGAGTGCGTCTGAGTCAGCATCAACGAGT
GCGTCAGCCTCAGCAAGCACATCAGCTTCTGAATCTGCATCAACCAGTGCGTCAGCCTCA
GCATCGACAAGCGCCTCAGCTTCAGCAAGTACCAGTGCGTCAGCCTCAGCGTCGACAAGT
GCGTCGGCTTCAGCAAGTACCTCAGCGTCTGAATCAGCGTCAACAAGTGCTTCGGCTTCA
GCGTCAACGAGTGCGTCTGAGTCAGCATCAACGAGTACGTCAGCCTCAGCAAGCACATCA
GCTTCTGAATCGGCCTCAACCAGTGCGTCAGCCTCAGCATCGACAAGCGCCTCAGCTTCA
GCAAGTACCAGTGCGTCAGCCTCAGCAAGTACCAGTGCGTCAGCCTCAGCGTCGACAAGT
GCGTCGGCCTCAACCAGTGCATCTGAATCGGCCTCAACCAGTGCGTCAGCCTCAGCATCG
ACAAGTGCGTCTGAATCTGCATCAACGAGTGCTTCGGCTTCAGCAAGCACATCAGCATCT
GAATCGGCCTCAACCAGTGCTTCGGCCTCAGCGTCAACGAGTGCTTCAGTCTCAGCAAGC
ACAAGCGCCTCAGCCTCAGCATAAACCAGTGCGTCAGCTTCAGCATCAACCAGTGCGTCG
GCTTCAGCAAGCACAAGCGCCTCAGCTTCAGCAAGCACAAGTGCTTCAGTCTCAGCAAGT
ACCAGTGCGTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCAGCAAGTACCAGTGCTTCA
GCTTCCGCATCAACGAGTGCGTCAGCTTCAGCAAGCACAAGTGCGTCAGCCTCAGCAAGT
ACCAGTGCATCAGAGTCAGCAAGTACCAGTGCTTCAGCTTCCGCATCAACGAGTGCGTCA
GCTTCAGCAAGTACCAGTGCATCAGAGTCAGCAAGTACCAGTGCATCAGAGTCAGCAAGT
ACTAGCGCATCAGCTTCAGCAAGTACTAGTGCATCAGCTTCAGCAAGCACCAGTGCCTCA
GCTTCAGCCTCAGCGTCAACCAGTGCGTCGGCTTCAGCAAGTACCAGTGCGTCAGCTTCA
GCAAGCACAAGTGCGTCAGCTTCAGCGTCAACCAGCGCCTCAGCTTCAGCATCAACGAGT
GCGTCGGCTTCAGCATCAACAAGTGCATCGGCTTCAGCAAGCACCAGTGCCTCAGCTTCA
GCAAGTACTAGCGCCTCAGCATCAGCGTCAACAAGTGCTTCGGCTTCAGCGTCAACGAGT
GCGTCTGAGTCAGCATCAACGAGTGCGTCAGCCTCAGCAAGCACATCAGCTTCTGAATCT
GCATCAACCAGTGCGTCAGCCTCAGCATCGACAAGCGCCTCAGCTTCAGCAAGTACCAGC
GCCTCAGCTTCAGCGTCAACCAGTGCTTCGGCTTCAGCAAGTACCAGTGCTTCGGCTTCA
GCAAGTACCAGTGCATCAGCTTCAGCAAGCACATCAGCTTCTGAATCTGCATCAACCAGT
GCGTCAGCCTCAGCATCGACAAGCGCCTCAGCTTCAGCAAGTACCAGCGCCTCAGCTTCA
GCGTCAACCAGTGCTTCGGCTTCAGCAAGTACCAGTGCTTCGGCTTCAGCAAGTACCAGT
GCATCAGCTTCAGCAAGTACCTCAGCGTCTGAATCGGCATCAACAAGTGCTTCAGCCTCA
GCATCAACGAGTGCGTCAGCCTCAGCAAGCACATCAGCTTCTGAATCTGCATCAACCAGT
GCGTCAGCCTCAGCATCGACAAGCGCCTCAGCTTCAGCAAGTACCAGTGCGTCAGCCTCA
GCGTCGACAAGTGCGTCGGCTTCAGCAAGTACCTCAGCGTCTGAATCAGCATCAACAAGT
GCCTCGGCTTCAGCATCAACGAGTGCATCAGCTTCAGCATCAACCAGTGCTTCAGCTTCA
GCAAGTACCAGTGCGTCGGCTTCAGCATCAACGAGTGCTTCAGTCTCAGCGTCAACCAGT
GCCTCTGAATCAGCATCAACAAGTGCCTCGGCTTCAGCAAGCACCAGTGCGTCGGCTTCA
GCAAGTACTAGTGCATCGGCTTCAGCATCGACAAGCGCCTCAGCTTCAGCAAGTACCAGT
GCGTCAGCCTCAGCGTCGACAAGTGCGTCGGCCTCAACCAGTGCATCTGAATCGGCATCA
ACCAGTGCGTCAGCCTCAGCAAGTACTAGTGCATCAGCTTCAGCATCAACGAGTGCATCG
GCTTCAGCGTCAACCAGTGCATCAGAGTCAGCAAGTACCAGTGCGTCAGCTTCCGCATCA
ACAAGTGCATCGGCTTCAGCAAGCACCAGTGCGTCGGCTTCAGCAAGTACTAGCGCCTCA
GCCTCAGCCTCAACCAGTGCCTCAGCCTCAGCAAGTATCTCAGCGTCTGAATCGGCATCA
ACGAGTGCGTCCGCTTCAGCAAGTACTAGCGCCTCAGCATCAGCGTCAACAAGTGCTTCG
GCTTCAGCGTCAACGAGTGCGTCTGAGTCAGCATCAACGAGTGCGTCAGCCTCAGCAAGC
ACATCAGCTTCTGAATCTGCATCAACCAGTGCGTCAGCTTCAGCGTCAACCAGTGCGTCG
GCTTCAGCGTCGACAAGTGCTTCGGCTTCAGCAAGCACATCAGCATCTGAATCGGCCTCA
ACCAGTGCTTCGGCCTCAGCGTCAACGAGTGCTTCAGTCTCAGCAAGCACAAGCGCCTCA
GCCTCAGCATCAACCAGTGCGTCAGCTTCAGCATCAACCAGTGCGTCGGCTTCAGCAAGC
ACAAGTGCTTCAGTCTCAGCAAGTACCAGTGCGTCGGCTTCAGCAAGTACTAGCGCCTCA
GCCTCAGCAAGTACCAGTGCTTCAGCTTCCGCATCAACGAGTGCGTCAGCTTCAGCAAGC
ACAAGTGCGTCAGCCTCAGCAAGTACCAGTGCATCAGAGTCAGCAAGTACCAGTGCATCA
GAGTCAGCAAGTACCAGTGCATCAGAGTCAGCAAGTACTAGCGCATCAGCTTCAGCAAGT
ACTAGTGCATCAGCTTCTGAATCTGCATCAACCAGTGCGTCAGCTTCAGCCTCAGCGTCA
ACCAGTGCGTCGGCTTCAGCAAGTACCAGTGCGTCAGCTTCAGCAAGCACAAGTGCGTCA
GCTTCAGCGTCAACCAGCGCCTCAGCTTCAGCATCAACGAGTGCGTCGGCTTCAGCATCA
ACGAGTGCATCGGCTTCAGCATCAACGTCTGCCTCAGCTTCAGCGTCAACCAGTGCCTCT
GAATCGGCATCAACCAGTGCTTCAGCCTCAGCAAGCACATCAGCTTCTGAATCTGCATCA
ACCAGTGCGTCAGCTTCAGCGTCAACCAGTGCGTCGGCTTCAGCGTCGACAAGTGCTTCG
GCTTCAGCAAGCACATCAGCATCTGAATCGGCCTCAACCAGTGCTTCGGCCTCAGCGTCA
ACGAGTGCTTCAGTCTCAGCAAGCACAAGCGCCTCAGCCTCAGCATCAACAAGTGCGTCA
GCTTCAGCAAGTACCAGTGCGTCGGCTTCAGCATCAACGAGTGCTTCAGTCTCAGCGTCA
ACAAGTGCTTCGGCTTCAGCGTCAACGAGTGCGTCTGAGTCAGCATCAACGAGTGCGTCA
GCCTCAGCAAGTACCAGTGCGTCAGCCTCAGCGTCGACAAGTGCGTCGGCCTCAACCAGT
GCATCTGAATCGGCCTCAACCAGTGCGTCAGCCTCAGCAAGTACTAGTGCATCAGCTTCA
GCATCAACGAGTGCATCGGCTTCAGCGTCAACCAGTGCATCAGAGTCAGCAAGTACCAGT
GCGTCAGCTTCCGCATCAACAAGTGCCTCGGCTTCAGCAAGCACCAGTGCGTCGGCTTCA
GCGTCAACCAGTGCATCAGAGTCAGCAAGTACCAGTGCGTCAGCTTCCGCATCAACAAGT
GCATCGGCTTCAGCAAGCACCAGTGCGTCGGCTTCAGCAAGTACTAGCGCCTCAGCATCA
GCGTCAACAAGTGCTTCGGCTTCAGCGTCAACGAGTGCGTCTGAGTCAGCATCAACGAGT
GCGTCAGCCTCAGCAAGCACATCAGCTTCTGAATCTGCATCAACCAGTGCTTCGGCCTCA
GCGTCAACGAGTGCTTCAGTCTCAGCAAGCACAAGCGCCTCAGCCTCAGCCTCAACCAGT
GCGTCAGCTTCAGCATCAACCAGTGCGTCGGCTTCAGCAAGCACAAGTGCTTCAGTCTCA
GCAAGTACCAGTGCGTCGGCTTCAGCAAGTACTAGCGCCTCAGCCTCAGCAAGTACTAGC
GCCTCAGCCTCAGCAAGTACCAGTGCTTCAGCTTCCGCATCAACGAGTGCGTCAGCTTCA
GCAAGCACAAGTGCGTCAGCCTCAGCAAGTACATCAGTTTCAAATTCAGCAAACCATTCG
AACTCACAAGTTGGAAATACTTCTGGATCGACAGGTAAATCCCAAAAAGAATTGCCTAAT
ACAGGTACTGAGTCGTCAATTGGATCTGTGTTACTTGGAGTTCTAGCAGCTGTTACAGGT
ATTGGATTGGTTGCGAAACGCCGTAAACGTGATGAAGAAGAGTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPJ_1669 [new locus tag: SPJ_RS13090 ]
- symbol: SPJ_1669
- description:
- length:
- theoretical pI:
- theoretical MW:
- GRAVY:
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED:
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb:
- DeepLocPro:
- SignalP:
- predicted transmembrane helices (TMHMM):
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq:
- UniProt:
⊟Protein sequence[edit | edit source]
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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