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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 31-JAN-2014

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae JJA
  • locus tag: SPJ_1850 [new locus tag: SPJ_RS12875 ]
  • pan locus tag?: PNEUPAN000429000
  • symbol: SPJ_1850
  • pan gene symbol?: —
  • synonym:
  • product: PblB

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPJ_1850 [new locus tag: SPJ_RS12875 ]
  • symbol: SPJ_1850
  • product: PblB
  • replicon: chromosome
  • strand: -
  • coordinates: 1748057..1754383
  • length: 6327
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    4261
    4321
    4381
    4441
    4501
    4561
    4621
    4681
    4741
    4801
    4861
    4921
    4981
    5041
    5101
    5161
    5221
    5281
    5341
    5401
    5461
    5521
    5581
    5641
    5701
    5761
    5821
    5881
    5941
    6001
    6061
    6121
    6181
    6241
    6301
    ATGGACGCTTTAACTAGACGACAATTTGACAGAGCCATGTTTGCCAAGGAAAGGACGCTG
    GCTATTCGTGTTGGTGATTATACTTCACGGGATATCAAAGAGGCTAGTTTTGAGTATGGC
    TACATCAAGGGCGATACTTATAAGCCTGGTGGAACCTGCGCTGGTAGCGGTAAAATTACC
    TTTACCAGTATCATTACCACGTTCAATAAGCTGGATACCCTGCACCCTGAGATTGGTCTA
    CTGGTTGGGAATACCTACCAGTGGGTCAAGATGGGGGAATACTTCATCAACGATATTGAG
    ATTGACCGAAACCGCAACACAACCACACTTGAACTTATGGACGGTATGTTTAAGCTCAAT
    CGTGAGTACGTGACGGATTTGCATTTCCCAGCTGAAGTACGAGAGGTTATTCAGGAAATC
    TGCCTGAAAACAGGCATTGAGTTAGCGAATGACTATTTCGGAATCAGCGCTATGCGTTAC
    CATATCGAGCAAGTTCCTGAAGGTAAGAAACTTTCGTTCAGGGATATGCTGAGCGCTATG
    ACTCAGATGATTGGGATGTCTTGTTTCTTCAACAGAGAAGGCAAGATGGAAATCCGTGAT
    TTGACTGAGTCCAATATCACGATCAACGCTGACAGTTACTTCTTGCATGGCTTGACCAAG
    AGTGAGATTGAGTATCAGATAGCTGGTATCACTTGTAAGACGGACAAGAAGTCTCTGACG
    GTCGGTATGAAGACAGGCCGGTCTTTGGAACTGGACAATGTCTTCATGACCCAGAGTGCT
    TTAAATGACCTGTATTACAAACTGAAAAACCTAACTTACTATCCGTATAATCTCAACTAC
    CAAGGGCATTTACTGCTTGAGGTTGGGCAGTGGGTAACCATTCAGACCAATAAGGAAGAG
    ACTTTTAAAGTTCCTGTCTTAAGTCAGAGCTTTACTTTCAAAGGTGGTCTGAGAGGACGT
    ATCAGCGCAGATAGTAAAGCTGGAAATGATACTCAGTATTCTTACGAGGGAACGATTACC
    AAGCAGATAAAGCAACAAGATGGCGTTGAAGCAAAAATCCAAGCGCAGATTGAAGCAGCA
    GATAAAGATTTTGACCAAAAGGTCGACAAAATCAAAAAAGACTTTAACGATCAAGTAGAA
    CTTGCCAAAGCCAGAGCTGAAGAAGTCAAGAGAGAACTGTCTGACACTATCAATCAGCGC
    TTTAATAGCTTTGACAACGGGCCATTGAAAGAAACTAAGCGCAAGGCTGAGGAAGCTTTG
    CGAAATGCTGGTGCAAGTACCCTGCTTGCACAGGAAGCTAAGCGGATTGAGCTGGATTCT
    GTTGCTAGACTTGAAGCGTTTAAGTCGCAGACTACGAGCGCACAAACGGCTCTGTCGGGT
    GACTTGGATGCCCTGAAACGGACTATCGCGAATGATATTCGACAGAAGCAAGCACAGGCT
    GAAGCTGAGATTGCCAAGCAAGTTGAAGCACTTAGCCGGACTAAAAATGAACTGGCTGGC
    GCAAGTACCCTGCTTGCACAGGAAGCTAAGCGGATTGGGCTGGATTCTGTTGCTAGACTT
    GAAGCGTTTAAGTCGCAGACTACGAGCGCACAAACGGCTCTGTCGGGTGACTTGGACGCT
    CTGAAACGGACTATCGCGAATGATATTCGACCGAAGCAAGCACAGGCTGAAACTGAGATT
    GCCAAGCAAGTTGAAGCACTTAGCCGGACTAAAAATGAACTGGCTGGCGTGAAGTCAGCG
    CAAGCGACGTATGAGGAGACGACGACTCGTAGACTGTCAGAACTGACCAACTTGGCCAAT
    GGTAAAGCCAGCAAGTCAGAACTCACGCAAACAGCTGAGGAGCTGGCTAGTCGGATTGCG
    AGTGTGCAGGCAGGTAGTTCACGGAATTACTTCAGGAATTCACGTTCAAGAACGTTCACA
    ACAGGAGGTCAAGCGGTATATGACTATCGAACATTCATAGTTCCTGATTTCTGGAAGAAC
    AGTGACAGATTCAAGCGTGATTATGTTCGCATATCTTTTGATGTGACTTTCCCTGTCGCC
    CTAGTAAATGACATGCCTGCTATGGTGCATTTTAGTGCTCATCCATGGTATGCCTACAGA
    AACTTAATTTTTAAAGGTGGAACTGTCGAACGCCAACATTTTGAGTTTACGATTGACTTG
    TCTAGTTCTTCTGAGACCTATCAGACTAATAATGTGTTCATTCGTTTTGGTACTAATTAT
    GGATTTCCTGCTGGTCTGCAGGTCGTCATTGAGAACGCTATGTTATCGGTTGGTAATTAT
    TTTCCAGCCTATCAACCAGCGTATGAAGACCAAGAAGACCGTGTCTCAGTAGTCGAATCC
    AACTTTAAGCAGCGTGCTGATTCACTCGACGCTGGTGTAAGCCGTCTGACTGAAGGGCTT
    AGAACTAAAGCCGATATCAGCTCACTCAATGTGACTGCTGAAAATATCCGGCAATCTGTG
    AAGAGCCTTGAGACAGACACGCAGAACAAGCTAAATCAGAAGTTGAGTCAGGCTGAATTT
    GAGGTGCGAGCTGGCTCTATCCGTCAGGAAATCCTGAACGCAACCAAGGATAAAGCCAGC
    AAGTCAGAACTCACGCAGACAGCTGAGGAGCTCTCTAGTAAGATAGCGAGTGTGCAGGTC
    GGAGGTAGGAATTATATCAGAAATGGTCAATTTAAGAACGGTTCGAAAAACTGGCTTGAA
    TATCAATCTGTTAATTTTGGTTTGAATTTCAACTATCAACACTCTCAAAATCCTAATAAT
    CGAAATCGTCCAGGACTACACTTCTATCACGATTCTCAAGATGTTGCTAATTTTTTTGGA
    ATTCAGCAATCTTTTGCATTTGATGGTATTCGAGGGGAAAAGGTGAGTGTATCTCTTCTT
    GTTTCAAAGGATGGCAGTGATAGCTACAGCGGTTTGAAAGTTGCATTGCACTACATCAAA
    AACAAAAACATTATTGGGCAAGAGTGGCAAAATATCCCAAGTCCACAAATAACATCGAAG
    TATAAGCGTTTCACATTTACGTTTACTTTATCAGACGATGTAGAGAATCTGAATTTGATG
    TTGTTTGGTGAAAAAGGGAAGACCATCAACCTCTATGTTACAGATGTTCAACTCGAAAGA
    GGTTCTGTCGCGACGGACTACAAAGAAGCTCCTGAAGATATAGAAGGTCAGATTTCAACA
    GTTGAATCCAACTTTAAACAGCGTGCTGATTCACTCGAAGCTGGTGTGAATCGTCTGACT
    GAAGGGCTTAGAACCAAAGTGGATATCAGCGCACTCAACGTGACTGCTGAAAATATCCGG
    CAATCTGTGAAGAGCCTTGAGACAGACACGCAGAACAAGCTAAATCAGAAGTTGAGTCAG
    GCTGAATTTGAGGTGCGAGCTGGCTCTATCCGTCAGGAAATCCTGAACGCAACCAAGGAT
    AAAGCAGATAAGACTTTAGTTGTATCTGAAGCTGGGAAATTGCGTGAAGAATTTTCAAAA
    ATGAAGGTGGGAGGACGGAATCTATGGATAAAATCCAAGACGGTTGGAGCTGTAATTGAA
    AAATTACCTGAAAACCACGTCACAGGTCAAAAAGAATGCTATAGGCTAGAGAACAACTCT
    ACTTTAACGTTCAACATTGAACCAGATTTCAGCTCAAGGTTGTATCAAAAAGTTACTTTT
    AGCGCTTGGGTCAAGTACGAAAATGTAGTCCAAGGTCGAAATTTTTGGAATGTATTTAAT
    TGCTTCAAACATTATCTTTTTAGAAAAAATAGTGAGACCGGAGTACAGAGTGGTCCAGAT
    TATGCTACGCTTGGTATGTATAAAGGTTCGGCAGATTGGAAATATATTACATTCACTTAT
    GACTACTCTGAAAAAACAAATTTTGATCAATTGAAGACATCATTGCGATTCAATCTTGAA
    GGTGCTACAAGCGGTACAGCTTGGGTAACAGGAATCAAGGTTGAAATCGGTAGTGTGGCG
    ACGGACTGGAGTCCTGCGCCTGAGGACGCTGATGGTCTCATCACTGAAGCTAAGGCTACC
    TTTGAGCGGACAGCTCAGGGCTTGCGAACCGATTTATCAGCTATTCAGGAATATGTAAAT
    AAAGACGGTCAGCGACAGGAAGCCCTACAGCGCTATACTCGTGAGGAGAGCACGAGACAA
    GCGATAGCAGTCCGTGAGCTGGTCAATCGTGATTTCGTTGGTAAGGCTACTTATCAAGAA
    GATGTTAAGGGTATCAATCAGAGGATTGAAGCTGTTAAAACTAGTGCGAATAAAGACATC
    GCTAGTCAAATCGCTAGCTATCGCCAATCTGTAGATGGTAAGTTCACGGATATTTCAAGT
    CAGATAACTACTTATAAGCAAGATGTGGGCGGTCAAATCAGTGGTCTATCAAATAGACTT
    ACAAGCAGTGAGCAAGGAACCACTACTCAGATTTCAAATCTTTCAAATCGGATAAACAGT
    AATAAACAAGGCACAGATAATCAGATTTCAAATTTAAAGACTCAGGTCGCTACAAACAAG
    GATAATGCTGAACGACAAATGGGTAGAATATCTAATCAGGTTTCTGCAAACAAAGCGAAT
    GCTGATAGTCAATTTGCGAATGTGACCAATCAACTAGCGCGAAAAGTAGAGACTACTGAC
    TTTCAGCGTGTTAAGGAAACCAGTAAACTTTACGAGCGGATTTTGGGAAATACTGAAAAT
    GGAATTGCGGATAAGGTTGCTCGCATGGCTCTGACCAATCAACTGTTTCAGGTTGAGGTG
    GCTAAAAATGCCAGCAATGGTCAAAATTTGTTGAAAGGCACAAAAGACTTCTCAGGGGGT
    TGGAAAAACAAGGGTGCAAATTGGAAAAAGCACGCTGAAAAATACAAAGGTGTTGATGTC
    CTATTTAAAAATAATTCGTGGAATGGCGTTGGACAAGAGATTGATGCAAAAATTGGTGAA
    GTCTATACATTCAGCTTATGGATGAAGAGCGACTGGAAGAATGATACAGTAAATTTCTAT
    GTAAATAGAAATGGATCTGTTGAGAAAGGTTGGGGTGTTCCATCTGAAACATCGGTCGCT
    ATAACAAGTGAATGGAAACGTTACTCATTTACCTTCAAAATTACTGTGGACGGCTTCATC
    TTTCCTCGTGTAGAACGACTTAATCAAAATACAAATCTATATATTGCAGGTCTTAAACTT
    GAAAAAGGATCGTATGCAACACCGTACACCGAAGCTCCTGAAGACACGGACGAAGCGATT
    CGCTCTGTTCAAAGCCAACTAACTGGCTCATGGGCAGTTCAAAACATCAACTCGGCTGGA
    GATATCATCTCTGGAATCAATCTTGGCGCCAATGGACATAACCGCTTTGTTGGGAAATTG
    ACCCACATCACTGGAGAGACCCTGATTGACAGAGCAGTCATCAAGTCTGCCATGGTTGAT
    AAGCTCAAAACGGCCAATTTTGAAGCTGGTTCGGTCACGACTACGATATTAGACGCTGAA
    GCGGTAACTGCTGAGAAGTTGAAAGTTGACAATGCGCTTATTAAAAAATTAACTGCAACT
    GATGCTTTTATTTACGAACTGATATCTAAACGTATCTTCTCTACTAAGGTTGAGTCCGTC
    ATTTCTAGCTCAACCTTCCTAGAAGCCTATCAAGGCCGAATCGGTGGATTCACACTTGGT
    CAATTTGACCAGGGTGGCGGTCGCTGGATTTCAGGTGTCAATCAGTTCTCTGTTGGTATG
    GGGAATGGTACCGGGCATGGAGTCCGGACAGCCTTCTGGGCGAACTGGGGAAATAATTGG
    AACTATGCCGGACCTAAAGCATGGAACGTCAATACTGATGGGAAAATGTACTGTAGGAAT
    GAAGTCGGTTTTTATGATCAAGTGGATTTTTCGAATTCATCGAGAGCAAACTTCTATGGG
    AATACTACTTTTTCTCGTTCTCCTGTGTTTTCAAATGGTATCGAACTTGGAAGTAAAGAT
    GTGCTTGGTGATGGTTGGAATCCCAAAGGCGGAAGGAATGCGGTTGTTTGGTGGAATCAG
    GTCGGTAGCGGTAGCGTGAAGTATTGGATGGAACAAAAATCAGACAGACGCTTAAAAGAG
    AACATCACAGATACAGCTGTGAAAGCCTTGGACAAAATCAACAGATTAAGAATGGTTGCA
    TTTGATTTCATCGAAAATAAGAAACATGAGGAGATTGGTCTAATAGCTCAAGAGGCTGAA
    ACCATCGTTCCAAGAATTGTCTCACGAGATCCTGAGAATCCAGATGGCTATCTGCATATC
    GACTATACCGCTTTAGTTCCTTACTTAATCAAGGCTATTCAAGAATTAAATCAAAAAATA
    GAAAAAATGGAGAAAACAATAGCATGA
    60
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    240
    300
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    420
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    720
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    840
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    1020
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    2160
    2220
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    2520
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    2700
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    2820
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    3000
    3060
    3120
    3180
    3240
    3300
    3360
    3420
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    3600
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    4140
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    5640
    5700
    5760
    5820
    5880
    5940
    6000
    6060
    6120
    6180
    6240
    6300
    6327

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPJ_1850 [new locus tag: SPJ_RS12875 ]
  • symbol: SPJ_1850
  • description: PblB
  • length: 2108
  • theoretical pI: 8.85012
  • theoretical MW: 236373
  • GRAVY: -0.562713

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED  :
    • Phage hyaluronidase
  • PFAM:
    no clan defined Peptidase_S74; Chaperone of endosialidase (PF13884; HMM-score: 49.4)
    and 4 more
    Baculo_PEP_C; Baculovirus polyhedron envelope protein, PEP, C terminus (PF04513; HMM-score: 24.2)
    DUF1497; Protein of unknown function (DUF1497) (PF07384; HMM-score: 20)
    HTH (CL0123) PuR_N; Bacterial purine repressor, N-terminal (PF09182; HMM-score: 14.6)
    no clan defined RPA_interact_M; Replication protein A interacting middle (PF14767; HMM-score: 14.3)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Extracellular
    • Cytoplasmic Score: 0.24
    • Cytoplasmic Membrane Score: 0.05
    • Cellwall Score: 0.8
    • Extracellular Score: 8.91
    • Internal Helices: 0
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.063005
    • TAT(Tat/SPI): 0.014092
    • LIPO(Sec/SPII): 0.008178
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MDALTRRQFDRAMFAKERTLAIRVGDYTSRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHPEIGLLVGNTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHIEQVPEGKKLSFRDMLSAMTQMIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKSLTVGMKTGRSLELDNVFMTQSALNDLYYKLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKEETFKVPVLSQSFTFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGVEAKIQAQIEAADKDFDQKVDKIKKDFNDQVELAKARAEEVKRELSDTINQRFNSFDNGPLKETKRKAEEALRNAGASTLLAQEAKRIELDSVARLEAFKSQTTSAQTALSGDLDALKRTIANDIRQKQAQAEAEIAKQVEALSRTKNELAGASTLLAQEAKRIGLDSVARLEAFKSQTTSAQTALSGDLDALKRTIANDIRPKQAQAETEIAKQVEALSRTKNELAGVKSAQATYEETTTRRLSELTNLANGKASKSELTQTAEELASRIASVQAGSSRNYFRNSRSRTFTTGGQAVYDYRTFIVPDFWKNSDRFKRDYVRISFDVTFPVALVNDMPAMVHFSAHPWYAYRNLIFKGGTVERQHFEFTIDLSSSSETYQTNNVFIRFGTNYGFPAGLQVVIENAMLSVGNYFPAYQPAYEDQEDRVSVVESNFKQRADSLDAGVSRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKASKSELTQTAEELSSKIASVQVGGRNYIRNGQFKNGSKNWLEYQSVNFGLNFNYQHSQNPNNRNRPGLHFYHDSQDVANFFGIQQSFAFDGIRGEKVSVSLLVSKDGSDSYSGLKVALHYIKNKNIIGQEWQNIPSPQITSKYKRFTFTFTLSDDVENLNLMLFGEKGKTINLYVTDVQLERGSVATDYKEAPEDIEGQISTVESNFKQRADSLEAGVNRLTEGLRTKVDISALNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVSEAGKLREEFSKMKVGGRNLWIKSKTVGAVIEKLPENHVTGQKECYRLENNSTLTFNIEPDFSSRLYQKVTFSAWVKYENVVQGRNFWNVFNCFKHYLFRKNSETGVQSGPDYATLGMYKGSADWKYITFTYDYSEKTNFDQLKTSLRFNLEGATSGTAWVTGIKVEIGSVATDWSPAPEDADGLITEAKATFERTAQGLRTDLSAIQEYVNKDGQRQEALQRYTREESTRQAIAVRELVNRDFVGKATYQEDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLSNRLTSSEQGTTTQISNLSNRINSNKQGTDNQISNLKTQVATNKDNAERQMGRISNQVSANKANADSQFANVTNQLARKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTNQLFQVEVAKNASNGQNLLKGTKDFSGGWKNKGANWKKHAEKYKGVDVLFKNNSWNGVGQEIDAKIGEVYTFSLWMKSDWKNDTVNFYVNRNGSVEKGWGVPSETSVAITSEWKRYSFTFKITVDGFIFPRVERLNQNTNLYIAGLKLEKGSYATPYTEAPEDTDEAIRSVQSQLTGSWAVQNINSAGDIISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTANFEAGSVTTTILDAEAVTAEKLKVDNALIKKLTATDAFIYELISKRIFSTKVESVISSSTFLEAYQGRIGGFTLGQFDQGGGRWISGVNQFSVGMGNGTGHGVRTAFWANWGNNWNYAGPKAWNVNTDGKMYCRNEVGFYDQVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVLGDGWNPKGGRNAVVWWNQVGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIENKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMEKTIA

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

  • PneumoExpress for strain D39V:

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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