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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 26-AUG-2017

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae SPN034156
  • locus tag: SPN034156_11200 [new locus tag: SPN034156_RS06300 ]
  • pan locus tag?: PNEUPAN000429000
  • symbol: SPN034156_11200
  • pan gene symbol?: —
  • synonym:
  • product: Phage protein (pseudogene)

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS, pseudogene
  • locus tag: SPN034156_11200 [new locus tag: SPN034156_RS06300 ]
  • symbol: SPN034156_11200
  • product: Phage protein (pseudogene)
  • replicon: chromosome
  • strand: +
  • coordinates: join(1156338..1159022,1159022..1161355)
  • length: 5019
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: FQ312045 join(1156338..1159022,1159022..1161355) NCBI
  • BioCyc:
  • MicrobesOnline:
  • PneumoBrowse for strain D39V:

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
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    2221
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    2461
    2521
    2581
    2641
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    3001
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    4441
    4501
    4561
    4621
    4681
    4741
    4801
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    4921
    4981
    ATGGCTCTTTCTCGCATGGTACAAAACACCAAAACAGCTCTTGGAGACTTCTCATTCAAC
    AGTGATATCCAGGACCGTAGGACATTCAACACGACTGAGACAGAAACCCTGTACTCTGTA
    TTGCTGGACGGCAAGCATAGTATCGTCGGAACGTGGGAAGGCGAGCTGGTGCGTGATAAC
    TTTGCGATGACTGTAAAGAAGAGTCGTGGTGAGAATCGTGGTGTTGTTATTACAACACAT
    AAGAATCTGAAGGACTACCAACGCACAAAAAACAGTCAGAATGTTGTCACAAGAATTCAC
    GCAAAGTCGACTTTTAAACCTGAAGGTGCTGAAAAAGAAACGACTATCAGAGTGACTGTT
    GATAGTCCTCTTATCAACTCATACCCTTATATCAATGAAAAAGAGTATGAGAACAACAAT
    GCTAAAACTGTTGAAGAGTTGCAGAAGTGGGCACAGTCTAAGTTTTCAAATGAGGGAATT
    GACAAGGTCTCTGATGCTATCAAGATTGAAGCTTATGAACTTGATGGGCAAGTGGTCCAT
    ATGGGCGACACGGTCAATCTCAAGAGCTGGAAACATAATGTCGATGCATTCAAGAAAGCT
    ATTGCTTATGAGTTCGATGCCTTAAAAGAAGAATACATCTCTCTGACTTTCGATGATAAG
    GCAGGTATTGGTGGTTCTAGAGCTTCTGGTGGCCTATCTAGCGCAGCCGATGCAATTCTT
    GGAGTGACAGAATCTGCACAAGAAATCGCCCTTGAAAAGGCTCTTCAAAATGCTGACTTA
    GACTTTGATCATAAGGCTGGATTGCTTAGACAGGAAATTTCTGACGATATTGAACTGGCC
    AAAGCCAGAGCTGAAGAAGTCAAGAGAGAACTGTCTGACACTATCAATCAGCGATTTAAT
    AGCTTTGACAACGGGCCATTGAAAGAAACTAAGCGCAAGGCTGAGGAAGCTTTGCGAAAT
    GCTGGCGCAAGTAGTTCTCTTGCTCAGGAATCCAAGCGGATTGGGCTGGATTCTGTTGCT
    ACACTTGTTGCGTTTAAGTCGCAGACTACTAGCGCACTAACTGCTCTGTTGGGTGACTTG
    GACGCTCTGAAACGGACTATTGTGAATGATATTCGCCCGAAGCAAGCACAGGGTGAAGCT
    GAGATTGTCAAGCAAGTCGAAGCACTTAGCCGGACTAAGAATGAACTGGCTGGCGTGAAG
    TCAGCGCAAGCGACGTATAAGGAGACGACGACTCGTAGACTGTCAGATCTGACCAACTTG
    GCCAATGGTAAAGCCAGTAAGTCAGAACTCACGCAGACAGCTGAGGAGCTCTCTAGTAAG
    ATAGCGAGTGTGCAGGCATCCGGTCGAAATCTATTCTTGAACTCACTATTTAAGCAGGAT
    ATTCCAAAAACAGGAATTTGGACAACGAGTACATATACGGCTACTATCGATAGCGAAAGT
    AAGTATCTTGGACACAAGGCTCTTAAAATTATAGGTCTGAATCCATCTGGCCGTGATGGA
    GGTAATCCCAAGGTTACTTATCCAGCTCTGGGTCAATTCGGGAAAGTAATTCCCGGAAGT
    ACGACTAATCAAGATGTAACCATTAGTTTTTATGCTAAGGCAAATAAAAATGGAATAATG
    CTAAGATCTCGATTAGGGAATATCGGATATAAAACTGGAAATGTGACATTGTCGACAGAA
    ATTAAGCGATATGCTGTCCATATTCCAAAAGGTTGGACAAACGAATCCAAGCGGACCACA
    AATGAATGGTTGTTCAATTTCAACCAAGAAGGAACCGTTTGGATTTGGATGCCGAAGTTT
    GAAATAAGCGATGTAGATACTTCTTATTCAGAAGCTCCTGAAGATATAGAAGGTCAGATT
    TCAACAGTAGAATCGACCTTCAAACAACGAGCCAACTCGCTCGAAGCTGGTGTAAGCCGT
    CTGACTGAAGGCCTTAGAACCAAAGCGGATATCAGCTCACTCAATGTGACTGCTGAGAAT
    ATCCGGCAATCTGTAAGAGNTTGAGACAGACACGCAGAACAANTAAATCAGAAGTTGAGT
    CAGGCTGAATTTGAGGTGCGAGCCGGCTCTATCCGTCAGGAAATCCTGAACGCAACCAAG
    GATAAAGCAGATAAGACTTTAGTTGTATCTGAAGCCGGGAAATTGCGTGAAGAATTTTCA
    AAAATGAAGGTGGGAGGCCGGAATCTATGGATAAAATCCAAGACGGTTGGAGCTGTAATT
    GAAAAATTACCTGAAAACCACGTCACAGGTCAAAAAGAATGTTATAGGTTAGAGAACAAC
    TCTACTTTAACGTTCAACCTTGAACCAGATTTCAGCTCAAGGTTGTATCAAAAAGTTACT
    TTTAGCGCTTGGATCAAGTACGAAAATGTAGTCCAAGGTCGAAATTTTTGGAATGTATTT
    AATTGCTTCAAACATTATCTTTTTAGAAAAAATAGTGAGACCGGAGTACAGAGTGGTCCA
    GATTATGATACGCTTGGTAGGTATAAAGGTTCGGCAGATTGGAAATATATTACATTCACT
    TATGACTACTCTGAAAAAACAAATTTTGATCAATTGAAGACATCATTGCGATTCAATCTT
    GAAGGTGCTACAAGCGGCACAGCTTGGGTAACAGGAATCAAGGTTGAAATCGGTAGTGTG
    GCGACGGACTGGAGTCCTGCGCCTGAGGACGCTGATGGTCTCATAACTGAAGCTAAGGCT
    ACCTTTGAGCGGACAGCTCAGGGCTTGCGAACCGACTTATCAGCTATTCAGGAATATGTA
    AATAAAGACGGTCAGCGACAGGAAGCCCTACAGCGCTATACTCGTGAGGAGAGCACGAGA
    CAAGCGACAGCAGTCCGTGAGCTGGTCAATCGTGATTTCGTTGGTAAGGCTACTTATCAA
    GAAGATGTTAAGGGTATCAATCAAAGGATTGAAGCTGTTAAAACTAGTGCGAATAAAGAC
    ATCGCTAGTCAAATCGCTAGCTATCGTCAATCTGTAGATGGTAAGTTCACGGATATTTCA
    AGTCAGATAACTACTTATAAGCAAGATGTGGGCGGTCAAATCAGTGGTCTATCAAATAGA
    CTTACAAGCAGTGAGCAAGGAACCACTACTCAGATTTCAAATCTTTCAAATCGGATAAAC
    AGTAATAAGCAAGGCACAGATAATCAGATTTCAAATTTAAAGACTCAGGTCGCTACAAAC
    AAGGATAATGCTGAACGACAAATGGGTAGAATATCTGATCAGGTTTCTGCAAACAAAGCG
    AATGCTGATAGTCAATTTGCGAATGTGACCAATCAACTAGCGCGAAAAGTAGAGACTACT
    GACTTCCAGCGTGTTAAGGAAACCAGTAAACTTTACGAGCGGATTTTGGGCAATACTGAA
    AATGGAATTGCGGATAAGGTTGCTCGCATGGCTCTGACCAATCAACTGTTTCAGGTTGAG
    GTGGCTAAAAATGCCAGCAATGGTCAAAATTTGTTGAAAGGCACAAAAGACTTCTCAGGG
    GGTTGGAAAAACAAGGGTGCAAATTGGAAAAAGCACGCTGAAAAATACAAAGGTGTTGAT
    GTCCTATTTAAAAATAATTCGTGGAATGGCGTTGGACAAGAGATTGATGCAAAAATTGGT
    GAAGTCTATACATTCAGCTTATGGATGAAGAGCGACTGGAAGAATGATACAGTAAATTTC
    TATGTAAATAGAAATGGATCTGTTGAGAAAGGTTGGGGTGTTCCATCTGAAACATCGGTC
    GCTATAACAAGTGAATGGAAACGTTACTCATTTGCCTTCAAAATTACTGTGGACGGCTTC
    ATCTTTCCTCGTGTAGAACGACTTAATCAAAATACAAATCTATATATTGCAGGTCTTAAA
    CTTGAAAAAGGATCGTATGCAACACCGTACACCGAAGCTCCTGAAGACACGGACGAAGCG
    ATTCGCTCTGTTCAAAGCCAACTAACTGGCTCATGGGCAGTTCAAAACATCAACTCGGCT
    GGAGATATCATCTCTGGAATCAATCTTGGCGCCAATGGACATAACCGCTTTGTTGGGAAA
    TTGACCCACATCACTGGAGAGACCCTGATTGACAGAGCAGTCATCAAGTCTGCCATGGTT
    GATAAGCTCAAAACGGCCAATTTTGAAGCTGGTTCGGTCACGACTACGATATTAGACGCT
    GAAGCGGTCACGGCTGATAAAGTGAGATTTGATGCTGCGTTTATTAGAAAAATGACTGCA
    AATGACGCTTTTATTGACCAACTGACATCTAAACGTATCTTCTCTACTAAGGTTGAGTCC
    GTCATTTCTAGTTCAACCTTCCTAGAAGCCTATCAAGGCCGAATCGGTGGATTCACTATT
    GGGCGTTTTGCTCAAGGAAGAGGTCGCTGGATTTCTGGTATCAACCAATTCTCAGTTGGC
    ATGGGGAATGGTGAAGGAGGAAGCTATAATGGCGAAAATACCGCATTTTGGGCGAACTGG
    GGTCACAGTTGGAACTCTCCTGGCCCCAATGCTTGGTATGTAACAACATCAGGAAATATG
    TATTGCCGAAACGGAGCAGATTTCCACGGGAAGGTTGACTTTTCGAATTCATCGAGAGCA
    AACTTTTATGGGAATACTACTTTTTCTCGTTCTCCTGTGTTTTCAAATGGTATCGAACTT
    GGAAGTAAAGATGTGCTTGGTGATGGCTGGAATCCCAAAGGAGGAAGGAATGCGGTTGTT
    TGGTGGAATCAGGTCGGTAGCGGTAGCGTGAAGTATTGGATGGAACAAAAATCAGACAGA
    CGCTTAAAAGAGAACATCACAGATACAGCTGTGAAAGCCTTGGATAAAATCAACAGATTA
    AGAATGGTTGCATTTGATTTCATCGAAAATAAGAAACATGAGGAGATTGGTCTAATAGCT
    CAAGAGGCTGAAACCATCGTTCCAAGAATTGTCTCACGAGATCCTGAGAATCCAGATGGC
    TATCTGCATATTGACTATACCGCTTTAGTTCCTTACTTAATCAAGGCTATTCAAGAATTA
    AATCAAAAAATAGAAAAAATGGAGAAAACAATAGCATGA
    60
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    5019

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPN034156_11200 [new locus tag: SPN034156_RS06300 ]
  • symbol: SPN034156_11200
  • description: Phage protein (pseudogene)
  • length:
  • theoretical pI:
  • theoretical MW:
  • GRAVY:

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED:
  • PFAM:

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb:
  • SignalP:
  • predicted transmembrane helices (TMHMM):

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq:
  • UniProt:

⊟Protein sequence[edit | edit source]

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

  • PneumoExpress for strain D39V:

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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