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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 06-FEB-2015
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae ATCC 700669
- locus tag: SPN23F19090 [new locus tag: SPN23F_RS09630 ]
- pan locus tag?: PNEUPAN003389000
- symbol: SPN23F19090
- pan gene symbol?: —
- synonym:
- product: putative oligopeptide transporter permease protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPN23F19090 [new locus tag: SPN23F_RS09630 ]
- symbol: SPN23F19090
- product: putative oligopeptide transporter permease protein
- replicon: chromosome
- strand: -
- coordinates: 1851517..1851744
- length: 228
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: FM211187 (1851517..1851744) NCBI
- BioCyc: see SPN23F_RS09630
- MicrobesOnline: 5831715 MicrobesOnline
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181ATGAAAAAATATATTTTTATGCGTGTTTTGCGGTCATTGGTTTCGATTTTCTTAGTAACG
ACTTTGACCTACACGATTATCTATACCTTGGTTCCTCGAAAATTGATTTTCAAGCAGGAT
CCTAACTATAATAAAATTGCGACAACGGCTGATAAACGTGATAACTATGAAAATACTGTG
TTTGAGCGTATGGGCTACATTGAGTATTACGATACTAAAGAGTTGTAA60
120
180
228
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPN23F19090 [new locus tag: SPN23F_RS09630 ]
- symbol: SPN23F19090
- description: putative oligopeptide transporter permease protein
- length: 75
- theoretical pI: 9.75267
- theoretical MW: 9102.6
- GRAVY: -0.234667
⊟Function[edit | edit source]
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helix: 1
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.197978
- TAT(Tat/SPI): 0.000847
- LIPO(Sec/SPII): 0.019555
- predicted transmembrane helices (TMHMM): 1
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: CAR69668 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MKKYIFMRVLRSLVSIFLVTTLTYTIIYTLVPRKLIFKQDPNYNKIATTADKRDNYENTVFERMGYIEYYDTKEL
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: CodY (activation (repression)) regulon
CodY (TF) important in Amino acid metabolism; RegPrecise transcription unit transferred from TIGR4 data RegPrecise
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.