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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 11-FEB-2025
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae ATCC 700669
- locus tag: SPN23F_RS03135 [old locus tags: SPN23F06140 SPN23F_06140 ]
- pan locus tag?: PNEUPAN001594000
- symbol: SPN23F_RS03135
- pan gene symbol?: moeZ
- synonym:
- product: rhodanese-like domain-containing protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPN23F_RS03135 [old locus tags: SPN23F06140 SPN23F_06140 ]
- symbol: SPN23F_RS03135
- product: rhodanese-like domain-containing protein
- replicon: chromosome
- strand: +
- coordinates: 609393..609773
- length: 381
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_011900 (609393..609773) NCBI
- BioCyc: SPN23F_RS03135 BioCyc
- MicrobesOnline: see SPN23F06140
- PneumoBrowse for strain D39V: SPV_0590 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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121
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241
301
361ATGGTTACTTGGATTTTGTGGGCACTTATACTAGCAATGTTGGCGTGGATGGGCTTTAAC
TATCTTCGTATTCGCCGTGCGGCTAAAATTGTGGACAATGAGGAGTTTGAAGCCTTGATT
CGTACGGGTCAATTGATTGATTTGCGCGACCCAGCAGAATTCCACAGAAAACATATCCTT
GGTGCACGCAATATTCCTTCAAGTCAGTTGAAAACTAGTCTTGCAGCCCTTCGTAAAGAT
AAACCTGTCCTTCTCTACGAGAACCAACGTGCGCAACGAGTTACAAATGCAGCTCTTTAC
TTGAAAAAACAAGGTTTTTCTGAGATTTATATCCTTTCTTATGGCTTGGATTCTTGGAAA
GGGAAAGTGAAGACTAGCTAA60
120
180
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300
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381
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPN23F_RS03135 [old locus tags: SPN23F06140 SPN23F_06140 ]
- symbol: SPN23F_RS03135
- description: rhodanese-like domain-containing protein
- length: 126
- theoretical pI: 10.6277
- theoretical MW: 14577
- GRAVY: -0.12381
⊟Function[edit | edit source]
- TIGRFAM: phage shock operon rhodanese PspE (TIGR02981; EC 2.8.1.1; HMM-score: 20.9)thiazole biosynthesis domain (TIGR04271; HMM-score: 19.6)and 1 moreProtein synthesis tRNA and rRNA base modification tRNA 2-selenouridine synthase (TIGR03167; EC 2.9.1.-; HMM-score: 16.6)
- TheSEED: see SPN23F06140
- PFAM: Phosphatase (CL0031) Rhodanese; Rhodanese-like domain (PF00581; HMM-score: 54.2)and 1 moreLysE (CL0292) LysE; LysE type translocator (PF01810; HMM-score: 14.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 1.78
- Cytoplasmic Membrane Score: 8.16
- Cellwall Score: 0.06
- Extracellular Score: 0.01
- Internal Helix: 1
- DeepLocPro: Cytoplasmic Membrane
- Cytoplasmic Score: 0.0012
- Cytoplasmic Membrane Score: 0.9946
- Cell wall & surface Score: 0.0001
- Extracellular Score: 0.0042
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.089459
- TAT(Tat/SPI): 0.018818
- LIPO(Sec/SPII): 0.013012
- predicted transmembrane helices (TMHMM): 1
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000259256 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MVTWILWALILAMLAWMGFNYLRIRRAAKIVDNEEFEALIRTGQLIDLRDPAEFHRKHILGARNIPSSQLKTSLAALRKDKPVLLYENQRAQRVTNAALYLKKQGFSEIYILSYGLDSWKGKVKTS
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0590 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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