Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 11-FEB-2025
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae ATCC 700669
- locus tag: SPN23F_RS07625 [old locus tags: SPN23F15100 SPN23F_15100 ]
- pan locus tag?: PNEUPAN002830000
- symbol: SPN23F_RS07625
- pan gene symbol?: chrR
- synonym:
- product: NADPH-dependent FMN reductase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPN23F_RS07625 [old locus tags: SPN23F15100 SPN23F_15100 ]
- symbol: SPN23F_RS07625
- product: NADPH-dependent FMN reductase
- replicon: chromosome
- strand: +
- coordinates: 1461839..1462387
- length: 549
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_011900 (1461839..1462387) NCBI
- BioCyc: SPN23F_RS07625 BioCyc
- MicrobesOnline: see SPN23F15100
- PneumoBrowse for strain D39V: SPV_1375 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541ATGTCTAAAAAAGTATTATTTATCGTCGGATCACTACGTCAAGGTTCTTTCAACCACCAA
ATGGCGCTCGAAGCTGAGAAAGCACTTGCTGGTAAAGCGGAAGTTAGCTACCTTGATTAT
TCAGCCCTTCCTCTCTTCAGCCAAGATTTGGAAGTTCCAACACATCCAGCTGTAGCTGCT
GCTCGTGAAGCAGTTCTCGTTGCGGATGCTATCTGGATTTTCTCTCCAGTCTACAACTTC
TCTATCCCTGGTACAGTGAAAAACTTGCTTGACTGGCTATCTCGTGCCCTTGACTTGTCT
GATACACGTGGCGTTTCTGCCCTTCAAGACAAGTTTGTCACAGTATCATCTGTAGCCAAT
GCAGGGCACGATCAACTTTTCGCTATCTACAAAGACCTCTTGCCATTTATCCGTACACAA
GGCGTTGGTGATTTCACTGCTGCACGTGTTAATGACTCTGCCTGGGCAGACGGAAAATTG
GTTCTTGAAGAAACAGTCCTAAACTCACTTGAAAAACAAGCTCAAGACTTGGTCGAAGCG
ATTCAGTAA60
120
180
240
300
360
420
480
540
549
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPN23F_RS07625 [old locus tags: SPN23F15100 SPN23F_15100 ]
- symbol: SPN23F_RS07625
- description: NADPH-dependent FMN reductase
- length: 182
- theoretical pI: 4.64757
- theoretical MW: 19809.4
- GRAVY: 0.151099
⊟Function[edit | edit source]
- reaction: EC 1.-.-.-? ExPASy
- TIGRFAM: Cellular processes Detoxification arsenical resistance protein ArsH (TIGR02690; HMM-score: 32)Central intermediary metabolism Sulfur metabolism FMN reductase (TIGR03567; EC 1.5.1.38; HMM-score: 30.3)and 2 moreFMN reductase (TIGR03566; EC 1.5.1.-; HMM-score: 25.1)LLM-partnered FMN reductase, CE1759 family (TIGR04037; EC 1.-.-.-; HMM-score: 17.9)
- TheSEED: see SPN23F15100
- PFAM: Flavoprotein (CL0042) FMN_red; NADPH-dependent FMN reductase (PF03358; HMM-score: 87.5)and 1 moreFlavodoxin_2; Flavodoxin-like fold (PF02525; HMM-score: 45.4)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.8882
- Cytoplasmic Membrane Score: 0.0024
- Cell wall & surface Score: 0.0001
- Extracellular Score: 0.1093
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.020474
- TAT(Tat/SPI): 0.001243
- LIPO(Sec/SPII): 0.001855
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000039618 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MSKKVLFIVGSLRQGSFNHQMALEAEKALAGKAEVSYLDYSALPLFSQDLEVPTHPAVAAAREAVLVADAIWIFSPVYNFSIPGTVKNLLDWLSRALDLSDTRGVSALQDKFVTVSSVANAGHDQLFAIYKDLLPFIRTQGVGDFTAARVNDSAWADGKLVLEETVLNSLEKQAQDLVEAIQ
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1375 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]