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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 04-FEB-2016
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae INV200
- locus tag: SPNINV200_02810 [new locus tag: SPNINV200_RS01500 ]
- pan locus tag?: PNEUPAN001064000
- symbol: SPNINV200_02810
- pan gene symbol?: basA
- synonym:
- product: putative glutathione peroxidase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPNINV200_02810 [new locus tag: SPNINV200_RS01500 ]
- symbol: SPNINV200_02810
- product: putative glutathione peroxidase
- replicon: chromosome
- strand: -
- coordinates: 278701..279177
- length: 477
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: FQ312029 (278701..279177) NCBI
- BioCyc: see SPNINV200_RS01500
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0286 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421ATGACTTCACTTTATGATTTTTCCGTTTTGAACCAAAACAACCAAGCAACTCCCTTGGAT
AGCTATCGTGGCAAAGTTCTCTTGATTGTCAACACTGCTACTGGATGTGGTTTAACGCCC
CAGTACCAGGGACTTCAAGAACTCTATGAACGCTATCAAGATCAGGGCTTCGAAATATTG
GATTTCCCTTGCAATCAGTTTATGGGACAAGCACCCGGCAGCGCAGAGGAAATCAACACC
TTCTGTAGCCTACATTTTCAAACCACCTTCCCACGTTTTGCCAAGATTAAGGTCAACGGT
AAGGAAGCAGACCCTCTCTATGTCTGGTTAAAAGACCATAAATCCGGCCCACTAGGAAAA
CGAGTCGAATGGAATTTCGCTAAGTTTCTCATCGGTCGAGATGGGCAAGTCTTTGAACGC
TTTTCTTCAAAAACAGACCCAAAACAAATTGAAGAGGCGATACAAACTCTACTATAA60
120
180
240
300
360
420
477
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPNINV200_02810 [new locus tag: SPNINV200_RS01500 ]
- symbol: SPNINV200_02810
- description: putative glutathione peroxidase
- length: 158
- theoretical pI: 5.77081
- theoretical MW: 18025.3
- GRAVY: -0.433544
⊟Function[edit | edit source]
- reaction: EC 1.11.1.9? ExPASyGlutathione peroxidase 2 glutathione + H2O2 = glutathione disulfide + 2 H2O
- TIGRFAM: putative glutathione peroxidase Gpx7 (TIGR02540; EC 1.11.1.9; HMM-score: 116.1)
- TheSEED :
- Glutathione peroxidase family protein
- PFAM: Thioredoxin (CL0172) GSHPx; Glutathione peroxidase (PF00255; HMM-score: 132.7)and 3 moreAhpC-TSA; AhpC/TSA family (PF00578; HMM-score: 22)DUF4174; Domain of unknown function (DUF4174) (PF13778; HMM-score: 14)Redoxin; Redoxin (PF08534; HMM-score: 13.7)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- DeepLocPro: Extracellular
- Cytoplasmic Score: 0.4651
- Cytoplasmic Membrane Score: 0.0136
- Cell wall & surface Score: 0.0001
- Extracellular Score: 0.5212
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.065019
- TAT(Tat/SPI): 0.004201
- LIPO(Sec/SPII): 0.134008
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: CBW33915 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MTSLYDFSVLNQNNQATPLDSYRGKVLLIVNTATGCGLTPQYQGLQELYERYQDQGFEILDFPCNQFMGQAPGSAEEINTFCSLHFQTTFPRFAKIKVNGKEADPLYVWLKDHKSGPLGKRVEWNFAKFLIGRDGQVFERFSSKTDPKQIEEAIQTLL
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0286 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]