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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 11-FEB-2025

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae INV200
  • locus tag: SPNINV200_RS08430 [old locus tag: SPNINV200_15850 ]
  • pan locus tag?: PNEUPAN003193000
  • symbol: asp1
  • pan gene symbol?: asp1
  • synonym:
  • product: accessory Sec system protein Asp1

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPNINV200_RS08430 [old locus tag: SPNINV200_15850 ]
  • symbol: asp1
  • product: accessory Sec system protein Asp1
  • replicon: chromosome
  • strand: -
  • coordinates: 1611280..1612854
  • length: 1575
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_017593 (1611280..1612854) NCBI
  • BioCyc: SPNINV200_RS08430 BioCyc
  • MicrobesOnline:
  • PneumoBrowse for strain D39V:

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGTATTATTTTATTCCATTTTTAGAAAGTATGAATCAATCTTGGCAGGTGGATATTGTT
    CCTTGGTATCAAACGACCCATCGTTTGGAGTTCGATGATGTTTTGCATCAAATCAGAATT
    TTTAAAAGGGAAGGAATAAAGTCTAAAATTGTGTTACTACCCTATCATCCACATATGCGC
    TATCTTTTACATCGTCAAGATTTATTGGAAGTTGAAGCATTCTCTGTTTTTGATGCTATT
    CAGGATATTGAAAACGAAGAAATCTATCCCTTACAACTGAAAGATTTAGCATGGGATGAA
    GATTGTGACTTTATTTATACTCCCTTTTTAATTGCGGTAAAACAGAAAGGGGAGTTGCAT
    GCACATATAGAATTTGGAACGGAAGGTTTTATCAGTTACATAACCTATTTTAAAGATAAT
    CAGGTCGATTTTATTTGTTATTTTGATGATCGAGGCTTTTTATCTAGTCTTGTGAAATAT
    CAAGATAATCAGGCAGTAAGTCGTTATTATTACAATTCAAATGCTGAATGGCAGATTAAG
    GAATATTTGCAAGGGATTCATACGAAAGTGGAGGTTAACCCCCGTTTCAGTCATCGCTTT
    CGGAAATCAACTTATCAAAGCATGGATGAAGTTGTTTGGGAATTTTTTGAAAAATTTTTA
    ACAGCAGAGTACAAAGAGGGAGAATCATTTGTTCTTGCAGCTCAAACTAAGTATCAGAAT
    CAATTATTAAAACACTTACCAGAGCATGCTGATAAAATTTTGACTTTTTTTATTGAGCGA
    AATCAAGAAGATGATTTGAATCTTCATCATCAAGCAGTAAAACAAGCTAAGATTCTAATC
    AGTGATCGCCAAGATTTTTTAGAAAGATTAAAACAGCACTATCCTCAATTTACCTATAAA
    ATGCACCATTTACCATCTTTTGATACACGTTTAAAATTAGGAGTCAGTCAGAGAGTAAAA
    GAGTCAAAATTATATGTCCAACTAGATTTAAATACTCCTCTTAATTCAGAAGCATTATAT
    GAAGTCTTAAACTTTGTTTCTCAAAATCCATTGACTGAAATTGTCTTTGCAACATTTAAT
    GCAGAGGGTTATCAAATTGAGGCATTACAGAAGCATCTATTTACTTTGATTTCTGAGCGT
    TTAAACTTTAGAGATTTGCTAAAAGAATCGATTATCTCAGGAGCAGAAAATAAATTAGAA
    GAAAATAAGGAAGAGAATTATCGTTTTCAAATTGTAAATTTAAATGATGAGATAGGTTTG
    ATTCGTGAGTTAGAGTATACTCGTTTAATTGTTGATTTAAATCCTATTGCAAATATCTAT
    ACTCAGATTGCAGGGATTAGTGCAGGAATACCTCAAATCAATCTATCCGAGTCGGAATAT
    GTGACTCATTTACAAAATGGGTATATTTTATCAGATTTATCAGAATTTAGTAAAGCTGGG
    CACTATTTCTTAGATACTCTGGAACATTGGAATCAAGCTCTAATCCATTCTATTGATAAG
    ATTCGACAAAATACAGGGAATCAGTTTGTTCAGAAGTGGGAAAGATGGCTAGAGGAGGCG
    AAAAGTGAGCAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1560
    1575

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPNINV200_RS08430 [old locus tag: SPNINV200_15850 ]
  • symbol: Asp1
  • description: accessory Sec system protein Asp1
  • length: 524
  • theoretical pI: 5.20076
  • theoretical MW: 62376
  • GRAVY: -0.453244

⊟Function[edit | edit source]

  • TIGRFAM:
    Cellular processes Cellular processes Pathogenesis accessory Sec system protein Asp1 (TIGR03713; HMM-score: 483.9)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking accessory Sec system protein Asp1 (TIGR03713; HMM-score: 483.9)
  • TheSEED: see SPNINV200_15850
  • PFAM:
    GT-B (CL0113) Asp1; Accessory Sec system protein Asp1 (PF16993; HMM-score: 590.5)
    and 4 more
    NADP_Rossmann (CL0063) CMAS; Mycolic acid cyclopropane synthetase (PF02353; HMM-score: 18.6)
    RGS (CL0272) RGS; Regulator of G protein signaling domain (PF00615; HMM-score: 15.1)
    no clan defined FidL_like; FidL-like putative membrane protein (PF15941; HMM-score: 13)
    ABC_membrane (CL0241) ABC_membrane_3; ABC transporter transmembrane region (PF13748; HMM-score: 11.1)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.8648
    • Cytoplasmic Membrane Score: 0.102
    • Cell wall & surface Score: 0.0049
    • Extracellular Score: 0.0283
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.001
    • TAT(Tat/SPI): 0.000073
    • LIPO(Sec/SPII): 0.000413
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_000291174 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MYYFIPFLESMNQSWQVDIVPWYQTTHRLEFDDVLHQIRIFKREGIKSKIVLLPYHPHMRYLLHRQDLLEVEAFSVFDAIQDIENEEIYPLQLKDLAWDEDCDFIYTPFLIAVKQKGELHAHIEFGTEGFISYITYFKDNQVDFICYFDDRGFLSSLVKYQDNQAVSRYYYNSNAEWQIKEYLQGIHTKVEVNPRFSHRFRKSTYQSMDEVVWEFFEKFLTAEYKEGESFVLAAQTKYQNQLLKHLPEHADKILTFFIERNQEDDLNLHHQAVKQAKILISDRQDFLERLKQHYPQFTYKMHHLPSFDTRLKLGVSQRVKESKLYVQLDLNTPLNSEALYEVLNFVSQNPLTEIVFATFNAEGYQIEALQKHLFTLISERLNFRDLLKESIISGAENKLEENKEENYRFQIVNLNDEIGLIRELEYTRLIVDLNPIANIYTQIAGISAGIPQINLSESEYVTHLQNGYILSDLSEFSKAGHYFLDTLEHWNQALIHSIDKIRQNTGNQFVQKWERWLEEAKSEQ

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

  • PneumoExpress for strain D39V:

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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