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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 11-FEB-2025
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae INV200
- locus tag: SPNINV200_RS12680
- pan locus tag?: PNEUPAN001524000
- symbol: SPNINV200_RS12680
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPNINV200_RS12680
- symbol: SPNINV200_RS12680
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 562527..562664
- length: 138
- essential: unknown
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121ATGAAAATCAAAGAGCAAACTAGGAAGCTAGCCGCAGGCTGCTCAAAGTACAGCTTTGAG
GTTGCAGATAAAACTGACGAAGTCAGCTCAAAACACTGTTTTGAGGTTGTGAATAGAACC
GACGCAGTCAGTAGGTAA60
120
138
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPNINV200_RS12680
- symbol: SPNINV200_RS12680
- description: hypothetical protein
- length: 45
- theoretical pI: 8.77375
- theoretical MW: 5093.76
- GRAVY: -0.675556
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED:
- PFAM: no clan defined BTK; BTK motif (PF00779; HMM-score: 14)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- DeepLocPro: Extracellular
- Cytoplasmic Score: 0.0704
- Cytoplasmic Membrane Score: 0
- Cell wall & surface Score: 0.0005
- Extracellular Score: 0.9291
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.09212
- TAT(Tat/SPI): 0.007897
- LIPO(Sec/SPII): 0.032928
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_001809964 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MKIKEQTRKLAAGCSKYSFEVADKTDEVSSKHCFEVVNRTDAVSR
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]