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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 26-AUG-2017
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae OXC141
- locus tag: SPNOXC07450 [new locus tag: SPNOXC_RS03980 ]
- pan locus tag?: PNEUPAN001798000
- symbol: SPNOXC07450
- pan gene symbol?: —
- synonym:
- product: conserved hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPNOXC07450 [new locus tag: SPNOXC_RS03980 ]
- symbol: SPNOXC07450
- product: conserved hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 746810..747352
- length: 543
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: FQ312027 (746810..747352) NCBI
- BioCyc: see SPNOXC_RS03980
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0725 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541ATGACGCGCTATGCTTTGCTGGTGAGAGGTATCAATGTTGGTGGTAAGAATAAGGTCGTC
ATGGCGGAGCTTCGTCAAGAATTGACAAACTTGGGACTGGAAAAGGTTGAGAGCTACATC
AATAGTGGCAATATTTTCTTTACTTCGATAGATTCCAAAGCCCAATTGGTTGAAAAGCTA
GAGACTTTCTTTGCAGTCCATTATCCATTTATTCAGAGCTTTTCTTTACTGAGTCTAGAG
GACTTTGAGGCGGAACTTGAAAATCTACCAGCTTGGTGGAGCAGAGACTTGGCACGAAAA
GATTTTCTCTTTTACACTGAGGGTTTGGATGTGGACCAAGTCATCGCGACAGTTGAAAGT
TTAGAGCTGAAAGATGAAGTGCTTTATTTTGGAAAACTTGGGATTTTCTGGGGGAAATTT
TCTGAAGAATCCTATTCTAAGACTGCCTATCAGAAGTACTTGCTGAAGGTGCCTTTCTAC
CGCCACATTACTATTCGTAATGCTAAAACCTTTGACAAAATTGGTCAAATGCTAAAAAAA
TAA60
120
180
240
300
360
420
480
540
543
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPNOXC07450 [new locus tag: SPNOXC_RS03980 ]
- symbol: SPNOXC07450
- description: conserved hypothetical protein
- length: 180
- theoretical pI: 6.55425
- theoretical MW: 20923
- GRAVY: -0.128889
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- FIG01114713: hypothetical protein
- ⊞PFAM: no clan defined DUF1697; Protein of unknown function (DUF1697) (PF08002; HMM-score: 104.2)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: CBW32402 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MTRYALLVRGINVGGKNKVVMAELRQELTNLGLEKVESYINSGNIFFTSIDSKAQLVEKLETFFAVHYPFIQSFSLLSLEDFEAELENLPAWWSRDLARKDFLFYTEGLDVDQVIATVESLELKDEVLYFGKLGIFWGKFSEESYSKTAYQKYLLKVPFYRHITIRNAKTFDKIGQMLKK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0725 PneumoExpress