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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 20-DEC-2020
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae OXC141
- locus tag: SPNOXC_RS05535 [old locus tags: SPNOXC10290 SPNOXC_10290 ]
- pan locus tag?: PNEUPAN002271000
- symbol: glgA
- pan gene symbol?: glgA
- synonym:
- product: glycogen synthase GlgA
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPNOXC_RS05535 [old locus tags: SPNOXC10290 SPNOXC_10290 ]
- symbol: glgA
- product: glycogen synthase GlgA
- replicon: chromosome
- strand: +
- coordinates: 1039306..1040739
- length: 1434
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_017592 (1039306..1040739) NCBI
- BioCyc: SPNOXC_RS05535 BioCyc
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1008 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1381ATGAAAATTTTATTTGTAGCAGCAGAGGGTGCACCCTTTTCAAAAACAGGTGGTTTGGGA
GACGTCATTGGCGCTCTTCCAAAATCACTGGTAAAAGCTGGGCACGAAGTTGCAGTGATT
TTACCCTACTATGATATGGTAGAGGCTAAATTTGGAAATCAGATTGAAGATGTACTTCAT
TTTGAGGTGAGCGTTGGTTGGCGCAGACAGTATTGTGGAATTAAGAAAACAGTATTAAAT
GGTGTAACCTTCTACTTTATTGACAATCAATATTATTTCTTCCGTGGTCATGTTTACGGT
GATTTTGATGACGGAGAACGCTTTGCCTTTTTCCAACTGGCTGCCATTGAGGCTATGGAA
AGGATTGACTTTATTCCTGATCTTCTCCATGTTCATGACTACCATACAGCTATGATTCCT
TTCTTGTTGAAGGAAAAATACCGTTGGATTCAAGCCTATGAGGACATTGAAACAGTTTTA
ACCATTCATAATTTAGAATTCCAAGGACAATTTTCAGAAGGAATGTTGGGTGATTTGTTT
GGAGTTGGCTTTGAACGTTACGCTGATGGCACCCTTCGATGGAACAACTGTCTGAACTGG
ATGAAGGCAGGTATTCTCTATGCGAACCGTGTTTCAACCGTTTCACCTAGCTATGCTCAT
GAAATTATGACTAGTCAGTTTGGATGTAATTTGGATCAGATTCTTAAAATGGAGTCTGGT
AAAGTATCTGGTATCGTGAATGGGATTGATGCTGATCTTTATAATCCTCAGACGGATGCT
CTTTTAGACTATCATTTCAATCAGGAAGATTTGTCTGGGAAAGCCAAAAATAAGGCAAAA
TTGCAAGAAAGAGTTGGCTTGCCTGTTAGAGCAGACGTTCCACTGGTGGGAATTGTTTCT
CGTTTGACACGTCAAAAAGGTTTTGATGTGGTGGTCGAAAGTCTTCACCATATCTTGCAA
GAAGATGTTCAGATTGTTCTTTTGGGAACTGGCGATCCAGCCTTTGAAGGAGCTTTCTCA
TGGTTTGCTCAGATTTACCCAGACAAGCTATCAGCAAATATCACTTTTGATGTCAAACTT
GCTCAGGAAATCTACGCTGCTTGTGACCTCTTCCTCATGCCAAGTCGTTTTGAACCGTGT
GGCTTGTCTCAAATGATGGCTATGCGTTATGGAACCTTGCCATTGGTCCATGAAGTTGGA
GGCTTGCGAGATACAGTTCGCGCTTTCAATCCAATCGAAGGAAGCGGTACTGGCTTTAGC
TTTGACAATCTATCTCCTTATTGGTTAAATTGGACTTTCCAAACAGCATTGGACTTGTAT
AGAAACCATCCAGACATTTGGAGAAACCTACAAAAACAAGCTATGGAGAGTGACTTCTCA
TGGGATACAGCCTGCAAGTCATACCTTGACTTGTACCATAGTTTAGTTAATTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPNOXC_RS05535 [old locus tags: SPNOXC10290 SPNOXC_10290 ]
- symbol: GlgA
- description: glycogen synthase GlgA
- length: 477
- theoretical pI: 4.99525
- theoretical MW: 54128.3
- GRAVY: -0.0781971
⊟Function[edit | edit source]
- ⊞reaction: EC 2.4.1.21? ExPASy
- ⊞TIGRFAM: Energy metabolism Biosynthesis and degradation of polysaccharides glycogen/starch synthase, ADP-glucose type (TIGR02095; EC 2.4.1.21; HMM-score: 619.1)and 6 more
- TheSEED: see SPNOXC10290
- ⊞PFAM: GT-B (CL0113) Glyco_transf_5; Starch synthase catalytic domain (PF08323; HMM-score: 272.6)and 4 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000697294 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MKILFVAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVAVILPYYDMVEAKFGNQIEDVLHFEVSVGWRRQYCGIKKTVLNGVTFYFIDNQYYFFRGHVYGDFDDGERFAFFQLAAIEAMERIDFIPDLLHVHDYHTAMIPFLLKEKYRWIQAYEDIETVLTIHNLEFQGQFSEGMLGDLFGVGFERYADGTLRWNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQFGCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSANITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGFSFDNLSPYWLNWTFQTALDLYRNHPDIWRNLQKQAMESDFSWDTACKSYLDLYHSLVN
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1008 PneumoExpress