From PneumoWiki
Jump to navigation Jump to search
PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 05-APR-2025

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae OXC141
  • locus tag: SPNOXC_RS09985 [old locus tags: SPNOXC18130 SPNOXC_18130 ]
  • pan locus tag?: PNEUPAN003691000
  • symbol: SPNOXC_RS09985
  • pan gene symbol?: adr
  • synonym:
  • product: acyltransferase family protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPNOXC_RS09985 [old locus tags: SPNOXC18130 SPNOXC_18130 ]
  • symbol: SPNOXC_RS09985
  • product: acyltransferase family protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1838939..1840756
  • length: 1818
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_017592 (1838939..1840756) NCBI
  • BioCyc: SPNOXC_RS09985 BioCyc
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_1867 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGCGCATTAAATGGTTTTCCTTGGTTAGGATTACAGGTTTACTTTTGGTACTCTTGTAT
    CACTTCTTTCAGACGATCTTTCCTGGAGGATTTTTCGGGGTAGATGTCTTTTTCACATTT
    TCAGGTTTCCTGATTACAGCTCTACTCATTGAAGAATTTTCTAAAAACCATGAGATTGAT
    TTGATAGGATTTTTTAGAAGACGCTTTTATCGGATTGTGCCACCTGTGGTTTTGATGGTC
    TTGGTGACCATGCCTTTTACTTTCTTGGTTCGCCAAGACTATGTTGCTGGAATTGGTGGC
    CAGATTGCGAGCGTCTTAGGCTTTATGACCAACTTCTATGAACTCCTAACAGGTGGGAGT
    TATGAATCTCAGTTCATTCCTCATTTGTTTGTTCATAATTGGAGTTTGGCAGTTGAGGTT
    CACTACTATATTCTTTGGGGATTGGCAGTTTGGTTCTTATCCAAACAAGCTAAATCAAAT
    GGTCAGTTGAAGGGGATGGTCTTTCTCTTATCTGCTGTTGCCTTCTTGATCAGTTTCTTC
    TCCATGTTTATTGGTAGTTTTCTAGTGACCTCTTATTCCTCTGTTTATTTCTCCAGTTTA
    ACTCATGTCTATCCATTCTTTTTGGGAAGTATGTTAGCAACTATTGTAGGCGTTCGTCAG
    ACGACTTCCCTCGTCAAGCAGTTGGATAAAATCTGGGATTTACGAAAGACTTTGGTAGTT
    TTTGGAGGAGGCTTTGGTTTCCTAGTTCTTTTGACTTTCTTTGTCAAATTCACTTATCTT
    TTTGCCTATCTTATCGGCTTCTTACTTGCCAGTCTTGCAGCTCTTGCCATGATTCTGGCG
    GCGCGTGTCTTACATGAAAAGACACATCATATACAGGAGCCGAAGATTATCAGCTTTTTA
    GCGGATACTAGCTATGCGGTTTATCTTTTCCATTGGCCTTTCTATATCATTTTCTCACAG
    TTGACATCAAATCTTCTTGCTGTATTACTGACTCTGATTTGTTCTTATGGCTTTGCCAGT
    CTGTCATTTTATGTATTGGAACCTTGGATTGCAGGCAAGAACACACCTATTGTCCAAACC
    CTTCGTCCCCTGCCTTATATTCACGCAATTCTTGCAGCAGGTACAGGAATCTTGACCATC
    ATTGTCTGCACGGTGACCTTGTTGGCACCACAAGTGGGAGCGTTTGAGACAGACTTGACT
    GTCAATGGCTTGAAGCAAGCTGCAACAAATATTGGCCAGACCAAGGTGATGGCAGAACGG
    GCAGATGCAAACAGTTTGGGAATTGCTGATGGCACTATGTTAATTGGTGACTCAGTGGCT
    TTAAGGGCAAATACAGCACTACAGACAGCTCTTCCTGGAGCACAGATTAACGCGCAGGTC
    AGCGTAACAACCAAGACCGCAAATGAAATCATGCTAAATAATAGCCAGAATAAATTTTTA
    CCTAAGACGGTGGTCATTGCGACTGGGGTAAATAATCCTGAGAATTACAAGGATGACTGG
    GACAGTATCGTGAAAAATCTTCCTAAGGGACACCATATGATTTTGGTGACTCCTTATGAG
    GGAGATAAGACAAAAGAGACCTATGCCATCGTTGAGAAGGCTGCTGCCTATATGAGAGAA
    TTGGCAGAGAAGACACCTTACATTACGATAGCAGATTGGAATCAAGTTGCGAAAGAGCAT
    CCAGAAATTTGGGCTGGAACAGACCAGGTTCATTTCGGGAGTGAGAGTAGCACTATCGAA
    GCAGGAGCAAAATTGTATGCAGATACGATTGCCACAGCTTTGCAGACAGCTCAAGACAAG
    CCGGTTAAATCAAAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1560
    1620
    1680
    1740
    1800
    1818

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPNOXC_RS09985 [old locus tags: SPNOXC18130 SPNOXC_18130 ]
  • symbol: SPNOXC_RS09985
  • description: acyltransferase family protein
  • length: 605
  • theoretical pI: 8.73576
  • theoretical MW: 67256.1
  • GRAVY: 0.476198

⊟Function[edit | edit source]

  • reaction:
    EC 2.3.1.-?  ExPASy
  • TIGRFAM:
  • TheSEED: see SPNOXC18130
  • PFAM:
    Acyl_transf_3 (CL0316) Acyl_transf_3; Acyltransferase family (PF01757; HMM-score: 59.4)
    and 1 more
    MBG (CL0682) MBG_3; MBG domain (PF18887; HMM-score: 16.1)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 10
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0.9989
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0011
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.024949
    • TAT(Tat/SPI): 0.000202
    • LIPO(Sec/SPII): 0.004166
  • predicted transmembrane helices (TMHMM): 12

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_001220922 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MRIKWFSLVRITGLLLVLLYHFFQTIFPGGFFGVDVFFTFSGFLITALLIEEFSKNHEIDLIGFFRRRFYRIVPPVVLMVLVTMPFTFLVRQDYVAGIGGQIASVLGFMTNFYELLTGGSYESQFIPHLFVHNWSLAVEVHYYILWGLAVWFLSKQAKSNGQLKGMVFLLSAVAFLISFFSMFIGSFLVTSYSSVYFSSLTHVYPFFLGSMLATIVGVRQTTSLVKQLDKIWDLRKTLVVFGGGFGFLVLLTFFVKFTYLFAYLIGFLLASLAALAMILAARVLHEKTHHIQEPKIISFLADTSYAVYLFHWPFYIIFSQLTSNLLAVLLTLICSYGFASLSFYVLEPWIAGKNTPIVQTLRPLPYIHAILAAGTGILTIIVCTVTLLAPQVGAFETDLTVNGLKQAATNIGQTKVMAERADANSLGIADGTMLIGDSVALRANTALQTALPGAQINAQVSVTTKTANEIMLNNSQNKFLPKTVVIATGVNNPENYKDDWDSIVKNLPKGHHMILVTPYEGDKTKETYAIVEKAAAYMRELAEKTPYITIADWNQVAKEHPEIWAGTDQVHFGSESSTIEAGAKLYADTIATALQTAQDKPVKSK

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

Retrieved from "http://pneumowiki.med.uni-greifswald.de/index.php?title=SPNOXC_RS09985&oldid=119954"