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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 25-OCT-2019
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae NU83127
- locus tag: SPNU_2115 [new locus tag: EL277_RS11205 ]
- pan locus tag?: PNEUPAN003843000
- symbol: dhaT
- pan gene symbol?: adhB
- synonym:
- product: 1,3-propanediol dehydrogenase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPNU_2115 [new locus tag: EL277_RS11205 ]
- symbol: dhaT
- product: 1,3-propanediol dehydrogenase
- replicon: chromosome
- strand: -
- coordinates: 2091764..2092195
- length: 432
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: AP018936 (2091764..2092195) NCBI
- BioCyc: see EL277_RS11205
- MicrobesOnline:
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
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361
421ATGGTCAATGCCATCTTCCTTGGTGGTATGAGCTTTAATAATGCTGGTCTTGGTTATGTT
CACTCAATGGCTCACCAACTCGGTGCAGTATATAATTTGCCACATGGCGTGTGCTGTGCC
ATGTTGCTACCAGTTATAGAACGTGAAAATGCTAAACGTGTACCAGAAGCTTTCCGCAAT
GTTGCCAAAGCCTTGGGACTTCATGTAGAAGGTAAATCAGATCAAGAATGTGCCGATTAT
GCGATTGCTGAGATTGAGAAGCTTTCTGAGACAGTAGGTATTCCTAAGAAACTGACTGAA
CTTGGTATTGAAGAAAAAGATTTCGACTTTGAATACCTTTCTAAGAATGCCTTGATTGAT
GCCTGCGCACCAGGAAATCCATTTATGCCAACCTTAGAAGAAACGATTGCCTTTTATAAA
GAGTTATTTTAG60
120
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432
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPNU_2115 [new locus tag: EL277_RS11205 ]
- symbol: DhaT
- description: 1,3-propanediol dehydrogenase
- length: 143
- theoretical pI: 4.66022
- theoretical MW: 15711
- GRAVY: 0.0433566
⊟Function[edit | edit source]
- TIGRFAM: Energy metabolism Sugars lactaldehyde reductase (TIGR02638; EC 1.1.1.77; HMM-score: 154.1)and 2 moreNDMA-dependent methanol dehydrogenase (TIGR04266; EC 1.1.99.37; HMM-score: 51.5)phosphonate metabolism-associated iron-containing alcohol dehydrogenase (TIGR03405; HMM-score: 28.8)
- TheSEED:
- PFAM: DHQS (CL0224) Fe-ADH; Iron-containing alcohol dehydrogenase (PF00465; HMM-score: 118.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 9.97
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 0.01
- Extracellular Score: 0.02
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.033542
- TAT(Tat/SPI): 0.008045
- LIPO(Sec/SPII): 0.011653
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: BBG35952 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MVNAIFLGGMSFNNAGLGYVHSMAHQLGAVYNLPHGVCCAMLLPVIERENAKRVPEAFRNVAKALGLHVEGKSDQECADYAIAEIEKLSETVGIPKKLTELGIEEKDFDFEYLSKNALIDACAPGNPFMPTLEETIAFYKELF
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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