Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 25-NOV-2024
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae R6
- locus tag: SPR_RS03060 [old locus tag: spr0604 ]
- pan locus tag?: PNEUPAN001604000
- symbol: SPR_RS03060
- pan gene symbol?: murG
- synonym:
- product: UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPR_RS03060 [old locus tag: spr0604 ]
- symbol: SPR_RS03060
- product: UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
- replicon: chromosome
- strand: +
- coordinates: 616727..617785
- length: 1059
- essential: yes [1] DEG other strains
⊟Accession numbers[edit | edit source]
- Location: NC_003098 (616727..617785) NCBI
- BioCyc: see spr0604
- MicrobesOnline: see spr0604
- PneumoBrowse for strain D39V: SPV_0599 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021ATGAAAAAAATTGTCTTTACAGGTGGGGGGACGGTTGGACACGTTACCCTCAATCTTTTG
TTAATGCCCAAGTTCATCGAAGATGGTTGGGAAGTCCACTATATCGGGGACAAGCGTGGT
ATCGAACACCAAGAAATCCTTAAGTCAGGTTTGGATGTCACTTTCCACTCCATTGCGACT
GGGAAATTGCGTCGCTATTTCTCTTGGCAAAATATGCTGGACGTCTTCAAAGTTGGCTGG
GGAATCGTCCAATCGCTCTTTATCATGTTGCGACTTCGTCCACAGACCCTTTTTTCAAAG
GGGGGCTTTGTCTCAGTACCGCCTGTTATCGCAGCGCGTGTGTCAGGAGTGCCTGTCTTT
ATTCACGAATCTGACCTGTCTATGGGCTTGGCCAATAAAATCGCCTATAAATTTGCGACT
AAGATGTATTCAACCTTTGAGCAAGCTTCGAGTTTGTCTAAGGTTGAGCATGTGGGAGCA
GTGACCAAGGTTTCAGATCAAAAAAATCCAGAACCAGATGAATTGGTGGATATTCAAACC
CACTTTAATCATAAATTGCCGACTGTATTGTTTGTTGGCGGTTCTGCAGGTGCTCGTGTC
TTTAACCAATTGGTGACAGACCATAAGAAAGAACTAACAGAGCGCTACAATATTATCAAT
CTAACTGGAGATTCTAGTCTGAACGAGTTGAGCCAAAATCTTTTTCGTGTTGACTATGTG
ACCGATCTCTATCAACCCTTGATGGAATTGGCTGATATTGTTGTGACACGAGGTGGTGCC
AATACGATTTTTGAGCTCTTGGCGATAGCAAAATTGCATGTCATTGTGCCGCTTGGTCGT
GAAGCTAGTCGTGGTGACCAGATTGAAAATGCAGCTTACTTTGTAAAAAAAGGCTATGCA
GAAGACCTTCAAGAAAGCGATTTGACCTTGGATAGTTTGGAAGAGAAGCTTTCTCACTTA
CTAAGTCACAAGGAAGATTACCAAGCTAAGATGAAAGCTTCTAAGGAATTGAAATCTCTA
GCAGATTTTTATCAATTGTTGAAAAAAGATTTATCATAA60
120
180
240
300
360
420
480
540
600
660
720
780
840
900
960
1020
1059
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPR_RS03060 [old locus tag: spr0604 ]
- symbol: SPR_RS03060
- description: UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
- length: 352
- theoretical pI: 7.19125
- theoretical MW: 39448.1
- GRAVY: -0.107102
⊟Function[edit | edit source]
- reaction: EC 2.4.1.227? ExPASyUndecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase UDP-N-acetylglucosamine + Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol = UDP + GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol
- TIGRFAM: Cell envelope Biosynthesis and degradation of murein sacculus and peptidoglycan undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (TIGR01133; EC 2.4.1.227; HMM-score: 200.1)and 2 moreHypothetical proteins Conserved conserved hypothetical protein (TIGR00661; HMM-score: 29.4)Cellular processes Toxin production and resistance glycosyltransferase, MGT family (TIGR01426; EC 2.4.1.-; HMM-score: 22.4)
- TheSEED: see spr0604
- PFAM: GT-B (CL0113) Glyco_transf_28; Glycosyltransferase family 28 N-terminal domain (PF03033; HMM-score: 146)Glyco_tran_28_C; Glycosyltransferase family 28 C-terminal domain (PF04101; HMM-score: 123)and 1 moreUDPGT; UDP-glucoronosyl and UDP-glucosyl transferase (PF00201; HMM-score: 14.3)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 1.05
- Cytoplasmic Membrane Score: 8.78
- Cellwall Score: 0.08
- Extracellular Score: 0.09
- Internal Helices: 0
- DeepLocPro: Cytoplasmic Membrane
- Cytoplasmic Score: 0.0376
- Cytoplasmic Membrane Score: 0.9355
- Cell wall & surface Score: 0.0006
- Extracellular Score: 0.0263
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.041869
- TAT(Tat/SPI): 0.000374
- LIPO(Sec/SPII): 0.00515
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKKIVFTGGGTVGHVTLNLLLMPKFIEDGWEVHYIGDKRGIEHQEILKSGLDVTFHSIATGKLRRYFSWQNMLDVFKVGWGIVQSLFIMLRLRPQTLFSKGGFVSVPPVIAARVSGVPVFIHESDLSMGLANKIAYKFATKMYSTFEQASSLSKVEHVGAVTKVSDQKNPEPDELVDIQTHFNHKLPTVLFVGGSAGARVFNQLVTDHKKELTERYNIINLTGDSSLNELSQNLFRVDYVTDLYQPLMELADIVVTRGGANTIFELLAIAKLHVIVPLGREASRGDQIENAAYFVKKGYAEDLQESDLTLDSLEEKLSHLLSHKEDYQAKMKASKELKSLADFYQLLKKDLS
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0599 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
- ↑ Jane A Thanassi, Sandra L Hartman-Neumann, Thomas J Dougherty, Brian A Dougherty, Michael J Pucci
Identification of 113 conserved essential genes using a high-throughput gene disruption system in Streptococcus pneumoniae.
Nucleic Acids Res: 2002, 30(14);3152-62
[PubMed:12136097] [WorldCat.org] [DOI] (I p)