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serotype 1

NCBI: 26-OCT-2021

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae R6
  • locus tag: SPR_RS06775 [old locus tag: spr1361 ]
  • pan locus tag?: PNEUPAN002833000
  • symbol: SPR_RS06775
  • pan gene symbol?: atpG
  • synonym:
  • product: F0F1 ATP synthase subunit gamma

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPR_RS06775 [old locus tag: spr1361 ]
  • symbol: SPR_RS06775
  • product: F0F1 ATP synthase subunit gamma
  • replicon: chromosome
  • strand: -
  • coordinates: 1343887..1344765
  • length: 879
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCAGTATCTCTAAATGATATTAAAACAAAAATCGCCTCAACAAAAAATACGAGTCAA
    ATCACTAATGCCATGCAAATGGTATCGGCTGCTAAGCTAGGTCGTTCTGAAGAAGCTGCT
    CGCAACTTCCAAGTTTACGCTCAGAAAGTGCGTAAACTTTTGACAGATATCCTTCATGGT
    AATGGAGCTGGTGCTTCAACTAATCCGATGTTGATTAGCCGTTCTGTGAAGAAGACAGGC
    TATATCGTTATCACTTCAGACCGCGGTTTGGTTGGAGGTTATAATTCCTCTATTTTGAAA
    GCTGTTATGGAGTTGAAAGAAGAATACCACCCAGACGGTAAAGGTTTTGAAATGATCTGT
    ATCGGTGGGATGGGAGCTGATTTCTTTAAGGCTCGCGGTATTCAACCACTTTATGAATTA
    CGTGGCTTGTCAGACCAACCTAGCTTTGATCAAGTTCGTAAGATTATTTCAAAAACTGTT
    GAAATGTACCAAAATGAACTCTTTGATGAGCTTTATGTTTGCTACAACCACCATGTCAAT
    ACGCTAACCAGTCAAATGCGTGTGGAACAAATGCTTCCGATTGTTGACTTGGATCCAAAT
    GAAGCGGATGAAGAGTACAGCTTGACTTTTGAATTGGAAACCAGCCGAGAAGAAATTCTG
    GAGCAGTTGTTGCCTCAGTTTGCAGAAAGTATGATTTACGGTGCCATTATCGATGCCAAG
    ACAGCTGAGAATGCTGCGGGCATGACAGCCATGCAAACAGCGACAGATAATGCTAAGAAA
    GTCATCAATGATTTGACAATTCAGTATAACCGTGCCAGACAGGCGGCGATTACACAAGAA
    ATTACAGAAATCGTAGCAGGTGCTAGTGCCTTAGAATAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    879

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPR_RS06775 [old locus tag: spr1361 ]
  • symbol: SPR_RS06775
  • description: F0F1 ATP synthase subunit gamma
  • length: 292
  • theoretical pI: 4.85005
  • theoretical MW: 32324.6
  • GRAVY: -0.240753

⊟Function[edit | edit source]

  • reaction:
    EC 7.1.2.2?  ExPASy
    non-specified enzyme name
  • TIGRFAM:
    Metabolism Energy metabolism ATP-proton motive force interconversion ATP synthase F1, gamma subunit (TIGR01146; EC 3.6.3.14; HMM-score: 333.4)
    and 1 more
    alternate F1F0 ATPase, F1 subunit gamma (TIGR03323; EC 3.6.3.-; HMM-score: 93.1)
  • TheSEED: see spr1361
  • PFAM:
    no clan defined ATP-synt; ATP synthase (PF00231; HMM-score: 294.8)
    and 5 more
    TKC_like (CL0591) Transketolase_C; Transketolase, C-terminal domain (PF02780; HMM-score: 14.2)
    S11_L18p (CL0267) baeRF_family8; Bacterial archaeo-eukaryotic release factor family 8 (PF18851; HMM-score: 13.4)
    Actin_ATPase (CL0108) Hydantoinase_A; Hydantoinase/oxoprolinase (PF01968; HMM-score: 12.6)
    no clan defined Latrophilin; Latrophilin Cytoplasmic C-terminal region (PF02354; HMM-score: 11.9)
    DUF2119; Uncharacterized protein conserved in archaea (DUF2119) (PF09892; HMM-score: 11)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.030269
    • TAT(Tat/SPI): 0.009135
    • LIPO(Sec/SPII): 0.001473
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MAVSLNDIKTKIASTKNTSQITNAMQMVSAAKLGRSEEAARNFQVYAQKVRKLLTDILHGNGAGASTNPMLISRSVKKTGYIVITSDRGLVGGYNSSILKAVMELKEEYHPDGKGFEMICIGGMGADFFKARGIQPLYELRGLSDQPSFDQVRKIISKTVEMYQNELFDELYVCYNHHVNTLTSQMRVEQMLPIVDLDPNEADEEYSLTFELETSREEILEQLLPQFAESMIYGAIIDAKTAENAAGMTAMQTATDNAKKVINDLTIQYNRARQAAITQEITEIVAGASALE

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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