PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 26-OCT-2021
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae R6
- locus tag: SPR_RS09130
- pan locus tag?: PNEUPAN003539000
- symbol: SPR_RS09130
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPR_RS09130
- symbol: SPR_RS09130
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 1788070..1788264
- length: 195
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_003098 (1788070..1788264) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1802 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181ATGAAGAGAGGGATCATCTATTTCTTTATCGGCCTGTCACTCTTGGTATGGTTAGTGGAA
ATGTTTACTGATTGGTTTGATCAAGCCTTGCTTCGCCAATTCATTTGTGGTGCTTTGGGG
TTTGGATTTATGATTTTCGTCGTTTTCCCTATGGGAATGGAGTGGTTGAAAGGAGAGTCT
CATGACTGTGGTTAA60
120
180
195
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPR_RS09130
- symbol: SPR_RS09130
- description: hypothetical protein
- length: 64
- theoretical pI: 4.73401
- theoretical MW: 7459.92
- GRAVY: 0.842188
⊟Function[edit | edit source]
- TIGRFAM: Unknown function General integral membrane protein (TIGR03954; HMM-score: 14.6)
- TheSEED: data available for D39, Hungary19A-6, TIGR4
- ⊞PFAM: no clan defined zf-LITAF-like; LITAF-like zinc ribbon domain (PF10601; HMM-score: 12.9)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000820180 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MKRGIIYFFIGLSLLVWLVEMFTDWFDQALLRQFICGALGFGFMIFVVFPMGMEWLKGESHDCG
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1802 PneumoExpress