PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 28-AUG-2013
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae TCH8431/19A
- locus tag: HMPREF0837_12144 [new locus tag: HMPREF0837_RS10375 ]
- pan locus tag?: PNEUPAN003502000
- symbol: HMPREF0837_12144
- pan gene symbol?: ydfG
- synonym:
- product: oxidoreductase, short chain dehydrogenase/reductase family protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: HMPREF0837_12144 [new locus tag: HMPREF0837_RS10375 ]
- symbol: HMPREF0837_12144
- product: oxidoreductase, short chain dehydrogenase/reductase family protein
- replicon: chromosome
- strand: -
- coordinates: 1968978..1969739
- length: 762
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP001993 (1968978..1969739) NCBI
- BioCyc: see HMPREF0837_RS10375
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1712 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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721ATGGCAAAAAATGTAGTGATTACGGGAGCAACCTCAGGAATCGGTGAAGCGATTGCGCGT
GCTTATCTGGAGCAGGGTGAGGATGTCGTTCTAACAGGACGACGGATAGACAGATTAGAA
ATCCTCAAGTCGGAGTTTGCAGTAAGCTTTCCAAATCAAACCGTCTGGACTTTTCCACTA
GATGTGACGGATATGGTCATGGTGAAGACTGTTTGCTCTGATATTCTAGAAACGATAGGG
AGGATTGATATCTTGGTCAACAACGCCGGACTGGCTCTTGACTTGGCTCCCTATCAAGAC
TATGAGGAGTTGGATATGTTGACCATGTTGGATACCAATGTTAAAGGTCTGATGGCGGTT
ACTCGCTGTTTCTTGCCAGCAATGATAAAAGTCAATCAAGGTCATATTATCAATATGGGG
TCAACCGCAGGAATCTACGCCTATGCTGGTGCCGCTGTTTACTCAGCTACCAAGGCAGCG
GTTAAGACCTTTTCGGATGGACTGCGAATTGATACCATCGCAACGGATATCAAGGTGACG
ACCATTCAGCCTGGAATTGTCGAAACAGATTTTTCTACAGTGCGTTTTCATGGTGATAAA
GAACGAGCTGCGTCCGTTTACCAAGGAATAGAAACTTTGCAAGCTCAGGATATTGCAGAT
ACAGTAGTCTATGTGACTAGTCAACCTCGTCGTGTTCAGATTACAGATATGACCATTATG
GCCAATCAACAGGCGACAGGTTTCATGGTTCATAAAAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: HMPREF0837_12144 [new locus tag: HMPREF0837_RS10375 ]
- symbol: HMPREF0837_12144
- description: oxidoreductase, short chain dehydrogenase/reductase family protein
- length: 253
- theoretical pI: 4.78033
- theoretical MW: 27609.6
- GRAVY: 0.143478
⊟Function[edit | edit source]
- ⊞TIGRFAM: Fatty acid and phospholipid metabolism Biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase (TIGR01830; EC 1.1.1.100; HMM-score: 123.4)3-hydroxybutyrate dehydrogenase (TIGR01963; HMM-score: 121.1)2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (TIGR04316; EC 1.3.1.28; HMM-score: 110.1)acetoacetyl-CoA reductase (TIGR01829; EC 1.1.1.36; HMM-score: 102.3)and 15 more
- TheSEED :
- Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-)
- ⊞PFAM: NADP_Rossmann (CL0063) adh_short; short chain dehydrogenase (PF00106; HMM-score: 173.3)and 3 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MAKNVVITGATSGIGEAIARAYLEQGEDVVLTGRRIDRLEILKSEFAVSFPNQTVWTFPLDVTDMVMVKTVCSDILETIGRIDILVNNAGLALDLAPYQDYEELDMLTMLDTNVKGLMAVTRCFLPAMIKVNQGHIINMGSTAGIYAYAGAAVYSATKAAVKTFSDGLRIDTIATDIKVTTIQPGIVETDFSTVRFHGDKERAASVYQGIETLQAQDIADTVVYVTSQPRRVQITDMTIMANQQATGFMVHKK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1712 PneumoExpress