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From PneumoWiki
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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 17-DEC-2017

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae Xen35
  • locus tag: CXP32_05335 [new locus tag: CXP32_RS05335 ]
  • pan locus tag?: PNEUPAN002204000
  • symbol: CXP32_05335
  • pan gene symbol?: ftsW
  • synonym:
  • product: FtsW/RodA/SpoVE family cell cycle protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: CXP32_05335 [new locus tag: CXP32_RS05335 ]
  • symbol: CXP32_05335
  • product: FtsW/RodA/SpoVE family cell cycle protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1001278..1002507
  • length: 1230
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: CP025256 (1001278..1002507) NCBI
  • BioCyc:
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_0952 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGAAGATTAGTAAGAGGCACTTATTAAATTATTCCATCTTGATTCCCTACTTGCTTTTA
    TCTATTTTGGGCTTGATTGTGGTCTATTCGACCACCAGTGCTATTTTAATTGAAGAAGGC
    AAGAGCGCCTTGCAGTTGGTTCGAAACCAAGGAATCTTTTGGATTGTTAGTTTGATACTG
    ATTGCCTTAATTTATAAATTGAGACTAGATTTTTTGAGAAATGAGCGACTAATCATTTTA
    GTTATATTAATAGAAATGCTTTTATTGTTCTTGGCTCGTTTTATTGGTATTTCCGTAAAC
    GGGGCATACGGTTGGATTTCGGTTGCAGGAATAACTATTCAGCCAGCTGAGTACTTAAAA
    ATCATTATTATTTGGTATTTAGCTCACCGATTCTCCAAACAGCAAGAAGAAATAGCTACT
    TATGATTTTCAAGTTTTGACTCAAAATCAATGGCTTCCCCGTGCTTTTAATGATTGGCGA
    TTCGTTCTCCTAGTTCTGATTGGAAGTTTGGGAATTTTCCCTGATTTAGGAAATGCGACT
    ATTTTAGTCTTGGTTTCCTTGATTATGTATACAGTTAGTGGAATCGCTTATCGCTGGTTT
    TCAACCATTCTGGCGCTCGTATCTGCCGCTTCTGTCTTTGTCTTGACCACTATCAGCCTA
    ATCGGTGTTGAGACCTTTTCAAAAATTCCAGTATTCGGCTATGTAGCCAAGCGCTTTAGT
    GCCTTTTTTAATCCTTTTGCCGATCGTGCTGATGCAGGTCACCAGTTAGCTAATTCTTAT
    TTTGCCATGGTCAATGGCGGTTGGTTTGGTCTAGGTCTTGGAAACTCGATTGAAAAACGA
    GGTTATTTGCCAGAAGCTCATACAGACTTTGTCTTTTCTATCGTGATTGAAGAATTTGGC
    TTTGTTGGTGCCAGTCTTATTTTAGCTCTCTTGTTTTTCATGATTTTGCGGATTATCTTG
    GTCGGTATCCGAGCGGAGAATCCTTTCAATGCCATGGTTGCACTCGGTGTCGGAGGGATG
    ATGTTGGTTCAGGTATTTGTCAATATCGGAGGGATTTCGGGCTTGATTCCATCTACAGGA
    GTGACTTTCCCCTTCTTATCCCAGGGTGGAAATAGTCTTCTAGTCTTATCAGTGGCAGTA
    GCCTTTGTCTTAAATATTGATGCCAGTGAAAAACGCGCTAAATTGTACCGAGAATTGGAA
    AATCAACCAATGAACCTTCTGTTGAAGTAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1230

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: CXP32_05335 [new locus tag: CXP32_RS05335 ]
  • symbol: CXP32_05335
  • description: FtsW/RodA/SpoVE family cell cycle protein
  • length: 409
  • theoretical pI: 9.59959
  • theoretical MW: 45448.7
  • GRAVY: 0.829829

⊟Function[edit | edit source]

  • ⊞⊞TIGRFAM:
    Cell structure Cell envelope Biosynthesis and degradation of murein sacculus and peptidoglycan cell division protein FtsW (TIGR02614; HMM-score: 288.9)
    Cellular processes Cellular processes Cell division cell division protein FtsW (TIGR02614; HMM-score: 288.9)
    and 4 more
    Cell structure Cell envelope Biosynthesis and degradation of murein sacculus and peptidoglycan rod shape-determining protein RodA (TIGR02210; HMM-score: 221.3)
    Cellular processes Cellular processes Cell division rod shape-determining protein RodA (TIGR02210; HMM-score: 221.3)
    Cell structure Cell envelope Biosynthesis and degradation of murein sacculus and peptidoglycan stage V sporulation protein E (TIGR02615; HMM-score: 215.9)
    Cellular processes Cellular processes Sporulation and germination stage V sporulation protein E (TIGR02615; HMM-score: 215.9)
  • TheSEED: data available for D39, Hungary19A-6, TIGR4
  • ⊞⊞PFAM:
    Membrane_trans (CL0142) FTSW_RODA_SPOVE; Cell cycle protein (PF01098; HMM-score: 265.6)
    and 1 more
    TIM_barrel (CL0036) ALAD; Delta-aminolevulinic acid dehydratase (PF00490; HMM-score: 11.4)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • ⊞⊞PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 8
  • ⊞⊞DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0.9995
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0005
  • ⊞⊞SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.03164
    • TAT(Tat/SPI): 0.000529
    • LIPO(Sec/SPII): 0.033166
  • predicted transmembrane helices (TMHMM): 10

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: AUF84845 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MKISKRHLLNYSILIPYLLLSILGLIVVYSTTSAILIEEGKSALQLVRNQGIFWIVSLILIALIYKLRLDFLRNERLIILVILIEMLLLFLARFIGISVNGAYGWISVAGITIQPAEYLKIIIIWYLAHRFSKQQEEIATYDFQVLTQNQWLPRAFNDWRFVLLVLIGSLGIFPDLGNATILVLVSLIMYTVSGIAYRWFSTILALVSAASVFVLTTISLIGVETFSKIPVFGYVAKRFSAFFNPFADRADAGHQLANSYFAMVNGGWFGLGLGNSIEKRGYLPEAHTDFVFSIVIEEFGFVGASLILALLFFMILRIILVGIRAENPFNAMVALGVGGMMLVQVFVNIGGISGLIPSTGVTFPFLSQGGNSLLVLSVAVAFVLNIDASEKRAKLYRELENQPMNLLLK

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

⊞Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊞Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

Retrieved from "http://pneumowiki.med.uni-greifswald.de/index.php?title=CXP32_05335&oldid=174795"
Insert paragraph

NCBI: 17-DEC-2017

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae Xen35
  • locus tag: CXP32_05335 [new locus tag: CXP32_RS05335 ]
  • pan locus tag?: PNEUPAN002204000
  • symbol: CXP32_05335
  • pan gene symbol?: ftsW
  • synonym:
  • product: FtsW/RodA/SpoVE family cell cycle protein

Insert paragraph

⊟Genome View[edit | edit source]

Insert paragraph

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: CXP32_05335 [new locus tag: CXP32_RS05335 ]
  • symbol: CXP32_05335
  • product: FtsW/RodA/SpoVE family cell cycle protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1001278..1002507
  • length: 1230
  • essential: unknown other strains

Insert paragraph

⊟Accession numbers[edit | edit source]

  • Location: CP025256 (1001278..1002507) NCBI
  • BioCyc:
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_0952 PneumoBrowse

Insert paragraph

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGAAGATTAGTAAGAGGCACTTATTAAATTATTCCATCTTGATTCCCTACTTGCTTTTA
    TCTATTTTGGGCTTGATTGTGGTCTATTCGACCACCAGTGCTATTTTAATTGAAGAAGGC
    AAGAGCGCCTTGCAGTTGGTTCGAAACCAAGGAATCTTTTGGATTGTTAGTTTGATACTG
    ATTGCCTTAATTTATAAATTGAGACTAGATTTTTTGAGAAATGAGCGACTAATCATTTTA
    GTTATATTAATAGAAATGCTTTTATTGTTCTTGGCTCGTTTTATTGGTATTTCCGTAAAC
    GGGGCATACGGTTGGATTTCGGTTGCAGGAATAACTATTCAGCCAGCTGAGTACTTAAAA
    ATCATTATTATTTGGTATTTAGCTCACCGATTCTCCAAACAGCAAGAAGAAATAGCTACT
    TATGATTTTCAAGTTTTGACTCAAAATCAATGGCTTCCCCGTGCTTTTAATGATTGGCGA
    TTCGTTCTCCTAGTTCTGATTGGAAGTTTGGGAATTTTCCCTGATTTAGGAAATGCGACT
    ATTTTAGTCTTGGTTTCCTTGATTATGTATACAGTTAGTGGAATCGCTTATCGCTGGTTT
    TCAACCATTCTGGCGCTCGTATCTGCCGCTTCTGTCTTTGTCTTGACCACTATCAGCCTA
    ATCGGTGTTGAGACCTTTTCAAAAATTCCAGTATTCGGCTATGTAGCCAAGCGCTTTAGT
    GCCTTTTTTAATCCTTTTGCCGATCGTGCTGATGCAGGTCACCAGTTAGCTAATTCTTAT
    TTTGCCATGGTCAATGGCGGTTGGTTTGGTCTAGGTCTTGGAAACTCGATTGAAAAACGA
    GGTTATTTGCCAGAAGCTCATACAGACTTTGTCTTTTCTATCGTGATTGAAGAATTTGGC
    TTTGTTGGTGCCAGTCTTATTTTAGCTCTCTTGTTTTTCATGATTTTGCGGATTATCTTG
    GTCGGTATCCGAGCGGAGAATCCTTTCAATGCCATGGTTGCACTCGGTGTCGGAGGGATG
    ATGTTGGTTCAGGTATTTGTCAATATCGGAGGGATTTCGGGCTTGATTCCATCTACAGGA
    GTGACTTTCCCCTTCTTATCCCAGGGTGGAAATAGTCTTCTAGTCTTATCAGTGGCAGTA
    GCCTTTGTCTTAAATATTGATGCCAGTGAAAAACGCGCTAAATTGTACCGAGAATTGGAA
    AATCAACCAATGAACCTTCTGTTGAAGTAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1230

Insert paragraph

This data comes from external databases and cannot be edited.

Insert paragraph

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: CXP32_05335 [new locus tag: CXP32_RS05335 ]
  • symbol: CXP32_05335
  • description: FtsW/RodA/SpoVE family cell cycle protein
  • length: 409
  • theoretical pI: 9.59959
  • theoretical MW: 45448.7
  • GRAVY: 0.829829

Insert paragraph

⊟Function[edit | edit source]

  • ⊞TIGRFAM:
    Cell structure Cell envelope Biosynthesis and degradation of murein sacculus and peptidoglycan cell division protein FtsW (TIGR02614; HMM-score: 288.9)
    Cellular processes Cellular processes Cell division cell division protein FtsW (TIGR02614; HMM-score: 288.9)
    and 4 more
    Cell structure Cell envelope Biosynthesis and degradation of murein sacculus and peptidoglycan rod shape-determining protein RodA (TIGR02210; HMM-score: 221.3)
    Cellular processes Cellular processes Cell division rod shape-determining protein RodA (TIGR02210; HMM-score: 221.3)
    Cell structure Cell envelope Biosynthesis and degradation of murein sacculus and peptidoglycan stage V sporulation protein E (TIGR02615; HMM-score: 215.9)
    Cellular processes Cellular processes Sporulation and germination stage V sporulation protein E (TIGR02615; HMM-score: 215.9)
  • TheSEED: data available for D39, Hungary19A-6, TIGR4
  • ⊞PFAM:
    Membrane_trans (CL0142) FTSW_RODA_SPOVE; Cell cycle protein (PF01098; HMM-score: 265.6)
    and 1 more
    TIM_barrel (CL0036) ALAD; Delta-aminolevulinic acid dehydratase (PF00490; HMM-score: 11.4)

Insert paragraph

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Insert paragraph

⊟Localization[edit | edit source]

  • ⊞PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 8
  • ⊞DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0.9995
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0005
  • ⊞SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.03164
    • TAT(Tat/SPI): 0.000529
    • LIPO(Sec/SPII): 0.033166
  • predicted transmembrane helices (TMHMM): 10

Insert paragraph

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: AUF84845 NCBI
  • UniProt:

Insert paragraph

⊟Protein sequence[edit | edit source]

  • MKISKRHLLNYSILIPYLLLSILGLIVVYSTTSAILIEEGKSALQLVRNQGIFWIVSLILIALIYKLRLDFLRNERLIILVILIEMLLLFLARFIGISVNGAYGWISVAGITIQPAEYLKIIIIWYLAHRFSKQQEEIATYDFQVLTQNQWLPRAFNDWRFVLLVLIGSLGIFPDLGNATILVLVSLIMYTVSGIAYRWFSTILALVSAASVFVLTTISLIGVETFSKIPVFGYVAKRFSAFFNPFADRADAGHQLANSYFAMVNGGWFGLGLGNSIEKRGYLPEAHTDFVFSIVIEEFGFVGASLILALLFFMILRIILVGIRAENPFNAMVALGVGGMMLVQVFVNIGGISGLIPSTGVTFPFLSQGGNSLLVLSVAVAFVLNIDASEKRAKLYRELENQPMNLLLK

Insert paragraph

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

Insert paragraph

⊟Expression & Regulation[edit | edit source]

Insert paragraph

⊟Operon[edit | edit source]

Insert paragraph

⊟Regulation[edit | edit source]

  • regulator:

Insert paragraph

⊟Expression data[edit | edit source]

Insert paragraph

⊞Biological Material[edit | edit source]

This data comes from external databases and cannot be edited.

This data comes from external databases and cannot be edited.

This data comes from external databases and cannot be edited.

This data comes from external databases and cannot be edited.

This data comes from external databases and cannot be edited.

This data comes from external databases and cannot be edited.

This data comes from external databases and cannot be edited.

⊞Other Information[edit | edit source]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

Insert paragraph

⊟Relevant publications[edit | edit source]

Insert paragraph