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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 26-AUG-2017
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae OXC141
- locus tag: SPNOXC00910 [new locus tag: SPNOXC_RS00530 ]
- pan locus tag?: PNEUPAN000697000
- symbol: purD
- pan gene symbol?: purD
- synonym:
- product: phosphoribosylamine-glycine ligase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPNOXC00910 [new locus tag: SPNOXC_RS00530 ]
- symbol: purD
- product: phosphoribosylamine-glycine ligase
- replicon: chromosome
- strand: +
- coordinates: 88154..89416
- length: 1263
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: FQ312027 (88154..89416) NCBI
- BioCyc: see SPNOXC_RS00530
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0058 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
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1021
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1261ATGAAACTGCTTGTTGTCGGTTCTGGTGGTCGTGAGCATGCGATTGCTAAAAAGTTACTT
GAATCAAAAGACGTGGAAAAAGTCTTTGTAGCTCCTGGGAATGATGGGATGACTCTGGAT
GGTTTGGAATTGGTAAATATCTCTATTTCCGAACATTCTAAATTGATTGACTTCGCAAAG
ACCAATGATGTTGCTTGGACCTTTATCGGTCCAGATGATGCCCTTGCTGCTGGTATCGTG
GATGATTTTAACCAAGCTGGGCTTAAGGCCTTTGGTCCGACTAGGACTGCAGCGGAGCTG
GAGTGGTCCAAGGATTTTGCCAAGGAAATCATGGTCAAATATGGTGTTTCGACAGCAGCC
TATGGCACATTTTCAGATTTCGAGGAAGCAAAGGCCTATATCGAAAAGCATGGTGCGCCT
ATCGTAGTCAAGGCGGATGGCTTGGCGCTTGGGAAGGGTGTCGTCGTTGCTGAGACGGTT
GAGCAAGCGGTCGAAGCCGCTCATGAGATGCTTTTGGACAATAAATTTGGTGACTCAGGT
GCGCGCGTGGTTATTGAGGAATTCCTTGAAGGAGAGGAATTTTCACTCTTTGCCTTTGTT
AATGGTGATAAGTTCTACATCATGCCAACGGCTCAGGACCACAAACGTGCCTACGATGGC
GACAAAGGGCCTAACACGGGTGGTATGGGTGCCTATGCGCCAGTTCCACACTTACCACAG
AGTGTAGTTGATACAGCGGTTGACACCATTGTCAAGCCAGTTCTAGAAGGGATGATTAAA
GAAGGTCGCCCTTATCTGGGAGTTCTTTACGCAGGGCTTATCCTGACAGCTGATGGACCG
AAAGTCATTGAGTTCAACGCTCGGTTCGGAGATCCAGAAACTCAGATTATCTTGCCTCGC
TTGACCTCTGACTTTGCTCAAAATATCACAGATATCCTGGATAGCAAGGAGCCAAATATC
ATGTGGACGGACAAGGGTGTGACTCTGGGTGTGGTTGTCGCATCCAAGGGCTACCCGCTA
GACTATGAAAGGGGCGTTGAGTTGCCAGCCAAGACAGAAGGCGATGTCATCACCTACTAT
GCAGGGGCTAAGTTTGCGGAAAATAGCAGAGCACTGCTCTCAAACGGCGGACGAGTTTAT
ATGCTGGTTACCACAGTAGCCACCGTCAAAGAAGCCCAAGCCAGCATCTACCAAGAACTA
TCCCAACAAAAAATAGAAGGACTCTTCTACCGAACAGATATCGGAAGCAAGGCAAGTAAG
TAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPNOXC00910 [new locus tag: SPNOXC_RS00530 ]
- symbol: PurD
- description: phosphoribosylamine-glycine ligase
- length: 420
- theoretical pI: 4.57978
- theoretical MW: 45322.2
- GRAVY: -0.0728571
⊟Function[edit | edit source]
- ⊞TIGRFAM: Purines, pyrimidines, nucleosides, and nucleotides Purine ribonucleotide biosynthesis phosphoribosylamine--glycine ligase (TIGR00877; EC 6.3.4.13; HMM-score: 495.7)and 10 more
- ⊞TheSEED :
- Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Miscellaneous Miscellaneous - no subcategory EC 6.3.4.- Ligases that form carbon-nitrogen bonds Phosphoribosylamine--glycine ligase (EC 6.3.4.13)and 1 more - ⊞PFAM: ATP-grasp (CL0179) GARS_A; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (PF01071; HMM-score: 271)and 11 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: CBW31752 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MKLLVVGSGGREHAIAKKLLESKDVEKVFVAPGNDGMTLDGLELVNISISEHSKLIDFAKTNDVAWTFIGPDDALAAGIVDDFNQAGLKAFGPTRTAAELEWSKDFAKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPIVVKADGLALGKGVVVAETVEQAVEAAHEMLLDNKFGDSGARVVIEEFLEGEEFSLFAFVNGDKFYIMPTAQDHKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTAVDTIVKPVLEGMIKEGRPYLGVLYAGLILTADGPKVIEFNARFGDPETQIILPRLTSDFAQNITDILDSKEPNIMWTDKGVTLGVVVASKGYPLDYERGVELPAKTEGDVITYYAGAKFAENSRALLSNGGRVYMLVTTVATVKEAQASIYQELSQQKIEGLFYRTDIGSKASK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0058 PneumoExpress