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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 26-AUG-2017

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae OXC141
  • locus tag: SPNOXC08050 [new locus tag: SPNOXC_RS04350 ]
  • pan locus tag?: PNEUPAN001893000
  • symbol: pyk
  • pan gene symbol?: pyk
  • synonym:
  • product: putative pyruvate kinase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPNOXC08050 [new locus tag: SPNOXC_RS04350 ]
  • symbol: pyk
  • product: putative pyruvate kinase
  • replicon: chromosome
  • strand: +
  • coordinates: 819259..820764
  • length: 1506
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGAACAAACGTGTAAAAATCGTTGCAACTTTGGGTCCTGCGGTAGAAATCCGTGGTGGT
    AAAAAATTCGGTGAGGACGGATACTGGGGTGAAAAACTTGATGTTGAAGCTTCAGCTAAA
    AACATTGCTAAATTGATTGAAGCTGGTGCTAACACATTCCGATTCAACTTCTCACACGGC
    GACCACCAAGAACAAGGTGAGCGTATGGCAACTGTTAAACTTGCGGAAAAAATTGCAGGT
    AAAAAAGTTGGTTTCCTTCTTGATACAAAAGGACCTGAAATCCGTACAGAATTGTTCGAA
    GGTGAAGCTAAAGAATATTCATACAAAACTGGTGAAAAAATTCGTGTTGCAACTAAACAA
    GGAATCAAATCAACTCGTGAAGTGATTGCGTTGAACGTTGCTGGTGCTCTTGATATCTAT
    GATGATGTTGAAGTTGGTCGTCAAGTTTTGGTTGACGATGGTAAACTTGGTCTTCGTGTG
    GTTGCTAAAGATGATGCAACTCGTGAATTTGAAGTTGAAGTTGAAAACGATGGTATCATC
    GCTAAACAAAAAGGTGTGAACATCCCTAACACTAAAATTCCTTTCCCAGCTCTTGCTGAA
    CGCGATAACGACGATATCCGTTTCGGTCTTGAACAAGGTATCAACTTCATCGCAATTTCA
    TTCGTACGTACTGCAAAAGATGTGAACGAAGTTCGTGCAATCTGTGAAGAAACTGGAAAC
    GGACATGTTCAATTGTTCGCTAAAATCGAAAACCAACAAGGTATCGATAACTTAGACGAA
    ATCATCGAAGCAGCTGATGGTATTATGATTGCTCGTGGTGATATGGGTATCGAAGTACCG
    TTCGAAATGGTTCCAGTTTATCAAAAAATGATTATCAAGAAAGTCAATGCTGCAGGTAAA
    GTTGTTATCACTGCAACAAACATGCTTGAAACAATGACTGAAAAACCACGTGCAACTCGT
    TCAGAAGTATCAGACGTATTCAACGCTGTTATCGACGGAACTGACGCTACAATGCTGTCA
    GGCGAGTCTGCAAACGGTAAATACCCACTCGAGTCAGTAACTACAATGGCTACAATCGAC
    AAGAACGCTCAAGCTCTTCTTAATGAATACGGACGTCTTGATTCAGATTCATTTGAGCGT
    AACTCTAAGACAGAAGTAATGGCTTCTGCTGTTAAAGATGCTACTAGCTCAATGGATATC
    AAATTGGTTGTAACTCTTACTAAGACAGGTCATACTGCACGTTTGATTTCTAAATACCGT
    CCAAATGCTGACATCTTAGCATTGACATTTGACGAATTGACAGAACGTGGCTTGATGTTG
    AACTGGGGTGTTATCCCAATGTTGACAGATGCTCCATCTTCAACTGACGATATGTTCGAA
    ATCGCTGAACGTAAAGCGGTAGAAGCAGGTCTCGTTGAGTCAGGCGATGATATCGTTATC
    GTTGCTGGTGTGCCAGTAGGAGAAGCTGTTCGCACAAACACAATGCGTATCCGCACAGTA
    CGTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1506

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPNOXC08050 [new locus tag: SPNOXC_RS04350 ]
  • symbol: Pyk
  • description: putative pyruvate kinase
  • length: 501
  • theoretical pI: 4.77319
  • theoretical MW: 54754
  • GRAVY: -0.231936

⊟Function[edit | edit source]

  • ⊞TIGRFAM:
    Metabolism Energy metabolism Glycolysis/gluconeogenesis pyruvate kinase (TIGR01064; EC 2.7.1.40; HMM-score: 504.7)
    and 2 more
    2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (TIGR02311; EC 4.1.2.-; HMM-score: 18.2)
    2-dehydro-3-deoxyglucarate aldolase (TIGR03239; EC 4.1.2.20; HMM-score: 14.2)
  • ⊞TheSEED  :
    • Pyruvate kinase (EC 2.7.1.40)
    Carbohydrates Central carbohydrate metabolism Entner-Doudoroff Pathway  Pyruvate kinase (EC 2.7.1.40)
    and 3 more
    Carbohydrates Central carbohydrate metabolism Glycolysis and Gluconeogenesis  Pyruvate kinase (EC 2.7.1.40)
    Carbohydrates Central carbohydrate metabolism Pyruvate metabolism I: anaplerotic reactions, PEP  Pyruvate kinase (EC 2.7.1.40)
    Carbohydrates Organic acids Glycerate metabolism  Pyruvate kinase (EC 2.7.1.40)
  • ⊞PFAM:
    PK_TIM (CL0151) PK; Pyruvate kinase, barrel domain (PF00224; HMM-score: 492.8)
    and 2 more
    no clan defined PK_C; Pyruvate kinase, alpha/beta domain (PF02887; HMM-score: 114)
    PK_TIM (CL0151) HpcH_HpaI; HpcH/HpaI aldolase/citrate lyase family (PF03328; HMM-score: 31.7)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • ⊞PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • ⊞SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.035695
    • TAT(Tat/SPI): 0.000787
    • LIPO(Sec/SPII): 0.004866
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: CBW32462 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MNKRVKIVATLGPAVEIRGGKKFGEDGYWGEKLDVEASAKNIAKLIEAGANTFRFNFSHGDHQEQGERMATVKLAEKIAGKKVGFLLDTKGPEIRTELFEGEAKEYSYKTGEKIRVATKQGIKSTREVIALNVAGALDIYDDVEVGRQVLVDDGKLGLRVVAKDDATREFEVEVENDGIIAKQKGVNIPNTKIPFPALAERDNDDIRFGLEQGINFIAISFVRTAKDVNEVRAICEETGNGHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVYQKMIIKKVNAAGKVVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPLESVTTMATIDKNAQALLNEYGRLDSDSFERNSKTEVMASAVKDATSSMDIKLVVTLTKTGHTARLISKYRPNADILALTFDELTERGLMLNWGVIPMLTDAPSSTDDMFEIAERKAVEAGLVESGDDIVIVAGVPVGEAVRTNTMRIRTVR

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Expression data[edit | edit source]

⊞Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊞Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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