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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 26-AUG-2017
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae OXC141
- locus tag: SPNOXC12820 [new locus tag: SPNOXC_RS06905 ]
- pan locus tag?: PNEUPAN002783000
- symbol: SPNOXC12820
- pan gene symbol?: aapA
- synonym:
- product: putative membrane protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPNOXC12820 [new locus tag: SPNOXC_RS06905 ]
- symbol: SPNOXC12820
- product: putative membrane protein
- replicon: chromosome
- strand: -
- coordinates: 1302054..1302278
- length: 225
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: FQ312027 (1302054..1302278) NCBI
- BioCyc: see SPNOXC_RS06905
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1288 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181ATGCTACTGCAACTATTTTCTTTATATTTCGAGAGTTTGATCTTGACCACCATCCTTGTT
CTGATTTTTTTAGGGATTTGGATTGGTCTGAGAGCCATGTCGGGAGTTGATAAGACAGCC
AAGGCTCGCCAAGCCCATCTCTATGATATGATTATGATTGGAGTCTTGGTTGTCCCAGTA
TTATCCTTTGCGGTTATGAGTTTAATTCTTGTTTTCAAGGCATAA60
120
180
225
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPNOXC12820 [new locus tag: SPNOXC_RS06905 ]
- symbol: SPNOXC12820
- description: putative membrane protein
- length: 74
- theoretical pI: 9.8646
- theoretical MW: 8258.2
- GRAVY: 1.44189
⊟Function[edit | edit source]
- TIGRFAM: TIGR03943 family protein (TIGR03943; HMM-score: 14.6)
- TheSEED :
- FIG01114736: hypothetical protein
- ⊞PFAM: no clan defined DUF4059; Protein of unknown function (DUF4059) (PF13268; HMM-score: 105.8)and 2 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: CBW32935 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MLLQLFSLYFESLILTTILVLIFLGIWIGLRAMSGVDKTAKARQAHLYDMIMIGVLVVPVLSFAVMSLILVFKA
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1288 PneumoExpress