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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 28-AUG-2013
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae TCH8431/19A
- locus tag: HMPREF0837_10599 [new locus tag: HMPREF0837_RS02935 ]
- pan locus tag?: PNEUPAN001047000
- symbol: HMPREF0837_10599
- pan gene symbol?: manL
- synonym:
- product: PTS system, mannose/fructose/sorbose family, IIB component
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: HMPREF0837_10599 [new locus tag: HMPREF0837_RS02935 ]
- symbol: HMPREF0837_10599
- product: PTS system, mannose/fructose/sorbose family, IIB component
- replicon: chromosome
- strand: -
- coordinates: 537087..538085
- length: 999
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP001993 (537087..538085) NCBI
- BioCyc: see HMPREF0837_RS02935
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0264 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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961ATGACAATAATGAGTATCGGAATCATTATTGCGAGCCACGGCGAATTTGCTGCTGGTATT
CATCAGTCAGGATCTATGATCTTTGGTGAACAAGAAAAGGTTCAAGTTGTGACCTTTATG
CCAAATGAAGGTCCTGATGATCTATACGCTAAGTTTAATAACGCTGTTGCTGCATTTGAC
GCAGAAGATGAGGTTCTAGTTTTGGCTGACCTTTGGAGTGGTTCTCCATTTAACCAAGCT
AGTCGCGTGATGGGAGAAAATCCTGAGCGTAAGTTTGCCATCATCACAGGACTTAACTTA
CCGATGTTGATTCAAGCCTACACAGAGCGCCTCATGGACGCTGCTGCAGGTGTAGAAAAA
GTCGCTGCTAATATCATTAAAGAAGCCAAAGATGGCATCAAAGCTCTTCCAGAAGAGCTA
AATCCAGTTGAAGAAGTTGCAAGCGCTGCAGCTGCTCCAGTTGCCCAAACTGCTATCCCA
GAAGGAACTGTTATCGGAGACGGTAAATTGAAAATCAATCTTGCCCGTCTTGACACACGT
CTACTTCACGGTCAGGTTGCAACTGCTTGGACTCCAGATTCAAAAGCAAATCGTATCATC
GTTGCTTCAGATAACGTGGCTAAAGACGACCTTCGTAAAGAATTGATTAAACAAGCAGCT
CCAGGTAATGTCAAGGCTAACGTGGTTCCAATTCAAAAACTGATTGAGATTTCAAAAGAC
CCACGTTTTGGAGAAACACATGCCCTTATCTTGTTTGAAACACCTCAAGATGCCCTTCGT
GCCATCGAAGGCGGCGTGCCAATCAAGACTCTTAACGTTGGTTCTATGGCTCACTCAACA
GGTAAAACATTGGTCAATACCGTTTTGTCTATGGACAAAGAAGATGTTGCTACATTTGAA
AAAATGCGTGACTTGGGTGTTGAATTTGATGTCCGTAAAGTACCAAATGATTCTAAAAAA
GATTTGTTTGACTTGATTAACAAAGCCAATGTCAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: HMPREF0837_10599 [new locus tag: HMPREF0837_RS02935 ]
- symbol: HMPREF0837_10599
- description: PTS system, mannose/fructose/sorbose family, IIB component
- length: 332
- theoretical pI: 4.91903
- theoretical MW: 35788.9
- GRAVY: -0.0614458
⊟Function[edit | edit source]
- ⊞reaction: EC 2.7.1.69? ExPASy
- ⊞TIGRFAM: Transport and binding proteins Carbohydrates, organic alcohols, and acids PTS system, mannose/fructose/sorbose family, IIB component (TIGR00854; EC 2.7.1.69; HMM-score: 152.6)Signal transduction PTS PTS system, mannose/fructose/sorbose family, IIB component (TIGR00854; EC 2.7.1.69; HMM-score: 152.6)and 2 more
- ⊞TheSEED :
- PTS system, mannose-specific IIA component (EC 2.7.1.69)
- PTS system, mannose-specific IIB component (EC 2.7.1.69)
Carbohydrates Monosaccharides Mannose Metabolism PTS system, mannose-specific IIB component (EC 2.7.1.69)and 2 more - ⊞PFAM: no clan defined PTSIIB_sorb; PTS system sorbose subfamily IIB component (PF03830; HMM-score: 166.9)and 2 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: ADI68827 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MTIMSIGIIIASHGEFAAGIHQSGSMIFGEQEKVQVVTFMPNEGPDDLYAKFNNAVAAFDAEDEVLVLADLWSGSPFNQASRVMGENPERKFAIITGLNLPMLIQAYTERLMDAAAGVEKVAANIIKEAKDGIKALPEELNPVEEVASAAAAPVAQTAIPEGTVIGDGKLKINLARLDTRLLHGQVATAWTPDSKANRIIVASDNVAKDDLRKELIKQAAPGNVKANVVPIQKLIEISKDPRFGETHALILFETPQDALRAIEGGVPIKTLNVGSMAHSTGKTLVNTVLSMDKEDVATFEKMRDLGVEFDVRKVPNDSKKDLFDLINKANVK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0264 PneumoExpress