Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 31-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae Hungary19A-6
- locus tag: SPH_1967 [new locus tag: SPH_RS09605 ]
- pan locus tag?: PNEUPAN003345000
- symbol: SPH_1967
- pan gene symbol?: paaI
- synonym:
- product: thioesterase family protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPH_1967 [new locus tag: SPH_RS09605 ]
- symbol: SPH_1967
- product: thioesterase family protein
- replicon: chromosome
- strand: -
- coordinates: 1828082..1828486
- length: 405
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP000936 (1828082..1828486) NCBI
- BioCyc: see SPH_RS09605
- MicrobesOnline: 5696790 MicrobesOnline
- PneumoBrowse for strain D39V: SPV_1632 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361ATGAAAGACTTTCATTTTGACGCTATATCTGCCTTTGAAAATTACGAAATTGAAAAAATG
AGAGATGGTCACGTTGTGGTGACGACCAAAGTAGTGAACTCGTCGCTCAACTACTATGGC
AATGCCCATGGTGGCTATCTATTCACGCTATGTGACCAAATCAGTGGTTTGGTGGTTATC
TCGCTGGGACTTGATGGGGTGACACTCCAATCCTCTATCAACTACCTTAAGGCAGGAAAA
CTCGACGATGTATTGACCATTAAAGGAGAATGTGTCCATCAAGGTCGTACAACCTGTGTA
ATGGATGTGGATATCACCAATCAAGAAGGCAGAAATGTCTGCAAAGCAACCTTTACCATG
TTTGTCACAGGCCGGCGGTCAGAAGACAGACAGGTAAGGATATAA60
120
180
240
300
360
405
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPH_1967 [new locus tag: SPH_RS09605 ]
- symbol: SPH_1967
- description: thioesterase family protein
- length: 134
- theoretical pI: 6.50039
- theoretical MW: 14930.9
- GRAVY: -0.108955
⊟Function[edit | edit source]
- ⊞TIGRFAM: phenylacetic acid degradation protein PaaD (TIGR02286; HMM-score: 66.9)uncharacterized domain 1 (TIGR00369; HMM-score: 66.2)and 2 more
- TheSEED :
- Phenylacetic acid degradation protein PaaD, thioesterase
- ⊞PFAM: HotDog (CL0050) 4HBT; Thioesterase superfamily (PF03061; HMM-score: 70.2)and 3 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKDFHFDAISAFENYEIEKMRDGHVVVTTKVVNSSLNYYGNAHGGYLFTLCDQISGLVVISLGLDGVTLQSSINYLKAGKLDDVLTIKGECVHQGRTTCVMDVDITNQEGRNVCKATFTMFVTGRRSEDRQVRI
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: SPH_1967 < galT < galK
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1632 PneumoExpress