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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 19-NOV-2015

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae A66
  • locus tag: A66_01241 [new locus tag: A66_RS06185 ]
  • pan locus tag?: PNEUPAN002676000
  • symbol: A66_01241
  • pan gene symbol?: pstS2
  • synonym: pstS
  • product: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: A66_01241 [new locus tag: A66_RS06185 ]
  • symbol: A66_01241
  • product: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
  • replicon: chromosome
  • strand: -
  • coordinates: 1211553..1212431
  • length: 879
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: LN847353 (1211553..1212431) NCBI
  • BioCyc:
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_1232 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    GTGAAAAAAAGAAAAAAGCTTGCTCTGTCTCTTATCGCTTTTTGGCTGACGGCTTGTTTA
    GTAGGCTGTGCTAACTGGATTGATCGTGGAGAATCCATAACGGCTGTTGGCTCAACTGCC
    TTGCAACCCTTGGTTGAAGTAGCGGCAGATGAATTTGGCACGATCCATGTTGGAAAAACG
    GTCAATGTCCAAGGGGGAGGTTCTGGTACAGGCTTGTCCCAGGTTCAGTCTGGGGCAGTT
    GATATAGGAAACTCAGATGTATTTGCTGAGGAAAAAGACGGAATTGATGCTTCTGCTCTT
    GTTGACCACAAGGTCGCGGTAGCTGGCTTGGCTCTGATTGTCAATAAGGAGGTTGATGTT
    GATAACCTAACGACAGAGCAACTTCGTCAAATCTTCATAGGTGAGGTAACCAATTGGAAA
    GAGGTTGGTGGTAAGGACTTACCCATCTCTGTTATCAATCGGGCAGCCGGCTCTGGCTCT
    CGTGCTACCTTTGATACTGTCATTATGGAAGGTCAGTCTGCCATGCAAAGTCAGGAGCAG
    GATTCAAATGGAGCGGTAAAATCAATCGTATCAAAAAGTCCAGGAGCTATCTCTTATTTA
    TCTCTTACCTATATAGATGATTCGGTCAAAAGCATGAAGTTGAATGGCTATGACTTAAGT
    CCAGAAAATATAAGTAGCAATAATTGGCCTTTGTGGTCTTATGAGCATATGTATACATTG
    GGGCAGCCCAATGAGTTGGCTGCAGAATTTCTCAATTTTGTTCTCTCGGATGAGACCCAA
    GAAGGGATTGTCAAAGGATTGAAGTATATTCCGATTAAGGAAATGAAGGTTGAAAAAGAT
    GCTGCCGGAACTGTGACAGTGTTGGAAGGGAGACAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    879

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: A66_01241 [new locus tag: A66_RS06185 ]
  • symbol: A66_01241
  • description: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
  • length: 292
  • theoretical pI: 4.51194
  • theoretical MW: 31228.1
  • GRAVY: -0.0763699

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Transport and binding proteins Anions phosphate binding protein (TIGR02136; HMM-score: 323.6)
    and 3 more
    Metabolism Transport and binding proteins Anions phosphate ABC transporter, phosphate-binding protein PstS (TIGR00975; HMM-score: 63.6)
    phosphate ABC transporter substrate-binding protein (TIGR04505; HMM-score: 39.6)
    CRISPR-associated protein Cas4/Csa1, subtype I-A/APERN (TIGR01896; HMM-score: 12.1)
  • TheSEED: data available for D39, Hungary19A-6, TIGR4
  • PFAM:
    PBP (CL0177) PBP_like_2; PBP superfamily domain (PF12849; HMM-score: 123.9)
    and 5 more
    PBP_like; PBP superfamily domain (PF12727; HMM-score: 74.6)
    SBP_bac_11; Bacterial extracellular solute-binding protein (PF13531; HMM-score: 32.3)
    SBP_bac_1; Bacterial extracellular solute-binding protein (PF01547; HMM-score: 20)
    SBP_bac_6; Bacterial extracellular solute-binding protein (PF13343; HMM-score: 15.9)
    SBP_bac_8; Bacterial extracellular solute-binding protein (PF13416; HMM-score: 13)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.17
    • Cytoplasmic Membrane Score: 9.51
    • Cellwall Score: 0.16
    • Extracellular Score: 0.15
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.0001
    • Cytoplasmic Membrane Score: 0.7993
    • Cell wall & surface Score: 0.0109
    • Extracellular Score: 0.1897
  • SignalP: Signal peptide LIPO(Sec/SPII) length 22 aa
    • SP(Sec/SPI): 0.007908
    • TAT(Tat/SPI): 0.000113
    • LIPO(Sec/SPII): 0.990498
    • Cleavage Site: CS pos: 22-23. LVG-CA. Pr: 0.5254
  • predicted transmembrane helices (TMHMM): 1

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: CRI61952 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MKKRKKLALSLIAFWLTACLVGCANWIDRGESITAVGSTALQPLVEVAADEFGTIHVGKTVNVQGGGSGTGLSQVQSGAVDIGNSDVFAEEKDGIDASALVDHKVAVAGLALIVNKEVDVDNLTTEQLRQIFIGEVTNWKEVGGKDLPISVINRAAGSGSRATFDTVIMEGQSAMQSQEQDSNGAVKSIVSKSPGAISYLSLTYIDDSVKSMKLNGYDLSPENISSNNWPLWSYEHMYTLGQPNELAAEFLNFVLSDETQEGIVKGLKYIPIKEMKVEKDAAGTVTVLEGRQ

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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