PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

NCBI: 09-DEC-2016

⊟Summary

• organism: Streptococcus pneumoniae SP49
• locus tag: BMJ42_02191 [new locus tag: BMJ42_RS13470 ]
• pan locus tag^?: PNEUPAN002684000
• symbol: BMJ42_02191
• pan gene symbol^?: —
• synonym:
• product: chlorohydrolase

⊟Genome View

⊟Gene

⊟General

• type: CDS
• locus tag: BMJ42_02191 [new locus tag: BMJ42_RS13470 ]
• symbol: BMJ42_02191
• product: chlorohydrolase
• replicon: chromosome
• strand: -
• coordinates: 2072380..2072661
• length: 282
• essential: unknown

⊟Accession numbers

• Location: CP018136 (2072380..2072661) NCBI
• BioCyc:
• MicrobesOnline:
• PneumoBrowse for strain D39V:

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  
  ATGAAAATCAAAGAGCAAACTAGGAAGCTAGCCGCAGGTTGCTCAAAACACTGTTTTGAG
  GTTGTAGATGAAACTGACGAAGTCAGCTCAAAACATGGTTTTGAGGTTGTAGATGAAACT
  GACGAAGTCAGCTCAAAACATGGTTTTGAGGTTGTAGATGAAACTGACGAAGTCAGCTCA
  AAACATGGTTTTGAGGTTGTAGATGAAACTGACGAAGTCAGTAACAATACCTACGGTAAG
  GCGACGCTGACGTGGTTTGAAGAGATTTTCGAAGAGCATTAG
  60
  120
  180
  240
  282
  

⊟Protein

⊟General

• locus tag: BMJ42_02191 [new locus tag: BMJ42_RS13470 ]
• symbol: BMJ42_02191
• description: chlorohydrolase
• length: 93
• theoretical pI: 4.15607
• theoretical MW: 10573.3
• GRAVY: -0.750538

⊟Function

• TIGRFAM:
• TheSEED:
• PFAM:
  no clan defined DUF3567; Protein of unknown function (DUF3567) (PF12091; HMM-score: 21.8)
  Orthopox_F6; Orthopoxvirus F6 protein (PF06601; HMM-score: 18.1)
  PPP-I (CL0570) S8_pro-domain; Peptidase S8 pro-domain (PF16470; HMM-score: 17.7)
  and 4 more
  P-loop_NTPase (CL0023) DEAD; DEAD/DEAH box helicase (PF00270; HMM-score: 15)
  Phage_TACs (CL0567) Phage_TAC_8; Phage tail assembly chaperone protein Gp14 ()A118 (PF10666; HMM-score: 10.7)
  no clan defined DUF3638; Protein of unknown function (DUF3638) (PF12340; HMM-score: 10.7)
  YqbF; YqbF, hypothetical protein domain (PF14553; HMM-score: 7.4)

⊟Structure, modifications & cofactors

• domains:
• modifications:
• cofactors:
• effectors:

⊟Localization

• PSORTb: unknown (no significant prediction)
  • Cytoplasmic Score: 2.5
  • Cytoplasmic Membrane Score: 2.5
  • Cellwall Score: 2.5
  • Extracellular Score: 2.5
  • Internal Helices: 0
• SignalP: no predicted signal peptide
  • SP(Sec/SPI): 0.007122
  • TAT(Tat/SPI): 0.00145
  • LIPO(Sec/SPII): 0.001256
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI:
• RefSeq: APJ31413 NCBI
• UniProt:

⊟Protein sequence

• MKIKEQTRKLAAGCSKHCFEVVDETDEVSSKHGFEVVDETDEVSSKHGFEVVDETDEVSSKHGFEVVDETDEVSNNTYGKATLTWFEEIFEEH

⊟Experimental data

• protein localization:
• interaction partners:

⊟Expression & Regulation

⊟Operon

⊟Regulation

• regulator:

⊟Expression data

• PneumoExpress for strain D39V:

⊟Biological Material

⊟Mutants

⊟Expression vector

⊟lacZ fusion

⊟GFP fusion

⊟two-hybrid system

⊟FLAG-tag construct

⊟Antibody

⊟Other Information

You are kindly invited to share additional interesting facts.

⊟Literature

⊟References

⊟Relevant publications