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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 12-MAY-2020
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae 6A-10
- locus tag: HKM25_2128 [new locus tag: HKM25_RS10380 ]
- pan locus tag?: PNEUPAN003695000
- symbol: HKM25_2128
- pan gene symbol?: pcp2
- synonym: pcp
- product: pyrrolidone-carboxylate peptidase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: HKM25_2128 [new locus tag: HKM25_RS10380 ]
- symbol: HKM25_2128
- product: pyrrolidone-carboxylate peptidase
- replicon: chromosome
- strand: -
- coordinates: 2019358..2019789
- length: 432
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP053210 (2019358..2019789) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1870 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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361
421ATGAAAGTATTAGTGACAGGTTTTGAGCCCTTTGGAGGGGAAAAGGGCAATCCAGCTTTG
GAGGCCATTAAAGGTTTACCAGCTGAAATCCATGGTGCTGAGGTCCGTTGGCTAGAGGTG
CCTACAGTTTTTCACAAATCTGCTCAAGTATTGGAAGAAGAGATGAATCGTTATCAACCT
GACTTTGTCCTTTGTATTGGGCAAGCTGGTGGAAGAACTAGTTTGACACCTGAACGAGTG
GCCATTAATCAAGACGATGCACGCATTTCTGATAACGAAGATAATCAACCGATTGACCGT
CCCATTCGCCCAGATGGTGCTTCGGCCTACTTTAGTAGTTTGCCGATTAAAGCGATGGTT
CAAGCTATAAAAAAGAAGGATTACCGGCCTCTGTTTCCAATACGGCAGGGACTTTTGTCT
GCAGCCATTTGA60
120
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432
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: HKM25_2128 [new locus tag: HKM25_RS10380 ]
- symbol: HKM25_2128
- description: pyrrolidone-carboxylate peptidase
- length: 143
- theoretical pI: 5.78866
- theoretical MW: 15770.9
- GRAVY: -0.308392
⊟Function[edit | edit source]
- TIGRFAM: Protein fate Degradation of proteins, peptides, and glycopeptides pyroglutamyl-peptidase I (TIGR00504; EC 3.4.19.3; HMM-score: 136)
- TheSEED: data available for TIGR4
- PFAM: PgaPase (CL0379) Peptidase_C15; Pyroglutamyl peptidase (PF01470; HMM-score: 156.2)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 9.95
- Cytoplasmic Membrane Score: 0.05
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.929
- Cytoplasmic Membrane Score: 0.0139
- Cell wall & surface Score: 0.0001
- Extracellular Score: 0.057
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.006202
- TAT(Tat/SPI): 0.000173
- LIPO(Sec/SPII): 0.000694
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: QJS37793 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MKVLVTGFEPFGGEKGNPALEAIKGLPAEIHGAEVRWLEVPTVFHKSAQVLEEEMNRYQPDFVLCIGQAGGRTSLTPERVAINQDDARISDNEDNQPIDRPIRPDGASAYFSSLPIKAMVQAIKKKDYRPLFPIRQGLLSAAI
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1870 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]