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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 19-SEP-2021
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae TCH8431/19A
- locus tag: HMPREF0837_RS00205 [old locus tag: HMPREF0837_10037 ]
- pan locus tag?: PNEUPAN003616000
- symbol: HMPREF0837_RS00205
- pan gene symbol?: yidC2
- synonym:
- product: membrane protein insertase YidC
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: HMPREF0837_RS00205 [old locus tag: HMPREF0837_10037 ]
- symbol: HMPREF0837_RS00205
- product: membrane protein insertase YidC
- replicon: chromosome
- strand: -
- coordinates: 32914..33738
- length: 825
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_014251 (32914..33738) NCBI
- BioCyc: HMPREF0837_RS00205 BioCyc
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1850 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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781GTGAAAAAGAAACTAAAGTTGACTAGTTTGCTAGGACTGTCTCTGTTAATCATGACAGCC
TGTGCGACTAATGGGGTAACTAGCGATATTACAGCCGAATCGGCTGATTTTTGGAGTAAA
TTGGTTTACTTCTTTGCGGAAATCATTCGCTTTTTATCGTTTGATATTAGTATCGGAGTG
GGGATTATTCTCTTTACGGTCTTGATTCGTACAGTCCTCTTGCCAGTCTTTCAGGTGCAA
ATGGTGGCTTCTAGGAAAATGCAGGAAGCTCAGCCACGCATTAAGGCGCTTCGAGAACAA
TATCCAGGTCGAGATATGGAAAGCAGAACCAAACTAGAGCAGGAAATGCGTAAAGTATTT
AAAGAAATGGGTGTCAGACAGTCAGACTCTCTTTGGCCGATTTTGATTCAGATGCCGGTT
ATTTTGGCCTTGTTCCAAGCCCTATCAAGAGTTGACTTTTTAAAGACAGGTCATTTCTTA
TGGATTAACCTTGGTAGTGTGGATACAACCCTTGTTCTTCCGATTTTAGCAGCAGTATTC
ACCTTTTTAAGTACTTGGTTGTCCAACAAAGCTTTGTCTGAGCGAAATGGCGCTACGACT
GCGATGATGTATGGGATTCCAGTCTTGATTTTTATCTTTGCAGTTTATGCGCCAGGTGGA
GTCGCCCTATACTGGACAGTGTCTAATGCTTATCAAGTCTTGCAAACCTATTTCTTGAAT
AATCCATTCAAGATTATCGCAGAGCGCGAGGCCGTAGTACAGGCACAAAAAGATTTGGAA
AATAGAAAAAGAAAAGCCAAGAAAAAGGCTCAGAAAACGAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: HMPREF0837_RS00205 [old locus tag: HMPREF0837_10037 ]
- symbol: HMPREF0837_RS00205
- description: membrane protein insertase YidC
- length: 274
- theoretical pI: 10.5595
- theoretical MW: 31056.7
- GRAVY: 0.254745
⊟Function[edit | edit source]
- TIGRFAM: Protein fate Protein and peptide secretion and trafficking membrane protein insertase, YidC/Oxa1 family (TIGR03592; HMM-score: 168.7)
- TheSEED: see HMPREF0837_10037
- PFAM: Oxa1 (CL0376) 60KD_IMP; 60Kd inner membrane protein (PF02096; HMM-score: 153.8)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 5
- SignalP: Signal peptide LIPO(Sec/SPII) length 20 aa
- SP(Sec/SPI): 0.003821
- TAT(Tat/SPI): 0.000113
- LIPO(Sec/SPII): 0.99543
- Cleavage Site: CS pos: 20-21. MTA-CA. Pr: 0.9958
- predicted transmembrane helices (TMHMM): 4
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000727904 NCBI
- UniProt: see HMPREF0837_10037
⊟Protein sequence[edit | edit source]
- MKKKLKLTSLLGLSLLIMTACATNGVTSDITAESADFWSKLVYFFAEIIRFLSFDISIGVGIILFTVLIRTVLLPVFQVQMVASRKMQEAQPRIKALREQYPGRDMESRTKLEQEMRKVFKEMGVRQSDSLWPILIQMPVILALFQALSRVDFLKTGHFLWINLGSVDTTLVLPILAAVFTFLSTWLSNKALSERNGATTAMMYGIPVLIFIFAVYAPGGVALYWTVSNAYQVLQTYFLNNPFKIIAEREAVVQAQKDLENRKRKAKKKAQKTK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1850 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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