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serotype 4
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Hu17
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serotype 1
INV200
serotype 14
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serotype 1
NCTC7466
serotype 2
NU83127
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SP49
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SPN032672
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serotype 3
SPN034183
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SPN994038
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SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 02-AUG-2013

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae gamPNI0373
  • locus tag: HMPREF1038_00805 [new locus tag: HMPREF1038_RS03965 ]
  • pan locus tag?: PNEUPAN001746000
  • symbol: HMPREF1038_00805
  • pan gene symbol?: ptsP
  • synonym:
  • product: PEP-utilizing enzymes family protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: HMPREF1038_00805 [new locus tag: HMPREF1038_RS03965 ]
  • symbol: HMPREF1038_00805
  • product: PEP-utilizing enzymes family protein
  • replicon: chromosome
  • strand: +
  • coordinates: 737456..738328
  • length: 873
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGATGAGAAATCAACTTGCCCTTAGTGGCGAAAAAATTCTTGAAAAAATTTATCCTCAA
    CTATTTCACCACGTCGGCATGATTCGTGGGGAATACTTATTGAGAGAGCTTAATCAAAAC
    ATCATATTAGCAAGTTGTCAGCAATTTGTAAAAGATTATCTTGATACTATTTGCTCCTTT
    TACTTAGATAAGGAAGTTTGGTATCGTTTTTCTGAATTAACGAATACAGAAGCCAATTGT
    TTAGCGGGGACTAGAGAGTTTTTTGACGAAGGGCATCCCTTGTTTGGCTATAGAGGAACC
    AGGCGTTTACTGGCGTGTTTGGATGAATTTCAGGCTGAATCACATGTCGTTACAGAAGTT
    TATCAAACCAATCCCAATCTGTCTCTTATTTTTCCTTTTGTCAATGATGCCGACCAATTA
    AAACAAGCTATTACAGTATTGCGTCAGTATGGCTTTACTGGGAAAGTCGGAACGATGATT
    GAATTACCGTCAGCGTATTTTGACTTATCTAGTATACTGGAAACGGGCATTTCAAAGATT
    GTAGTTGGAATGAATGATTTGACTTCCTTTGTTTTTGCGACTATGAGAAACAGTCAATGG
    CATGATATGGAAAGTCCAATAATGTTAGATATGCTAAGAGATATGCAGGATAAAGCAAGA
    AAGAACAAGATTAATTTTGCTGTAGCAGGCTATCTGAATACTTCTTTCATACAAAAAATG
    AATCAGTTGGGTATCAAGTGCATTATCCACTACAGTTCTATTCCAGAGATTTTTGATTTA
    GAGATTGACCATCCAGATCATCTTAAACACATAAAAGAAGAAAGTAAAAAATTACAAAGG
    AGTACCCATGATACCGCAAGAAATGTGGAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    873

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: HMPREF1038_00805 [new locus tag: HMPREF1038_RS03965 ]
  • symbol: HMPREF1038_00805
  • description: PEP-utilizing enzymes family protein
  • length: 290
  • theoretical pI: 6.17825
  • theoretical MW: 33568.3
  • GRAVY: -0.242069

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Energy metabolism Glycolysis/gluconeogenesis phosphoenolpyruvate synthase (TIGR01418; EC 2.7.9.2; HMM-score: 67.5)
    and 4 more
    phosphoenolpyruvate-protein phosphotransferase (TIGR01417; EC 2.7.3.9; HMM-score: 36.8)
    Metabolism Energy metabolism Other pyruvate, phosphate dikinase (TIGR01828; EC 2.7.9.1; HMM-score: 14.4)
    Metabolism Amino acid biosynthesis Aspartate family O-succinylhomoserine (thiol)-lyase (TIGR02080; EC 2.5.1.48; HMM-score: 13.7)
    VWFA-related Acidobacterial domain (TIGR03436; HMM-score: 11.8)
  • TheSEED  :
    • PEP-utilizing enzymes family protein
  • PFAM:
    PK_TIM (CL0151) PEP-utilizers_C; PEP-utilising enzyme, PEP-binding domain (PF02896; HMM-score: 66.2)
    and 4 more
    no clan defined pP_pnuc_1; Predicted pPIWI-associating nuclease (PF18165; HMM-score: 13.7)
    RNase_H (CL0219) DDE_Tnp_1; Transposase DDE domain (PF01609; HMM-score: 13.2)
    HTH (CL0123) DpnI_C; Dam-replacing HTH domain (PF17726; HMM-score: 13)
    TPR (CL0020) EAD11; Effector-associated domain 11 (PF19964; HMM-score: 12.6)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.97
    • Cytoplasmic Membrane Score: 0
    • Cellwall Score: 0.01
    • Extracellular Score: 0.02
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9891
    • Cytoplasmic Membrane Score: 0.0024
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0085
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.003671
    • TAT(Tat/SPI): 0.000172
    • LIPO(Sec/SPII): 0.002331
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: AFS42871 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MMRNQLALSGEKILEKIYPQLFHHVGMIRGEYLLRELNQNIILASCQQFVKDYLDTICSFYLDKEVWYRFSELTNTEANCLAGTREFFDEGHPLFGYRGTRRLLACLDEFQAESHVVTEVYQTNPNLSLIFPFVNDADQLKQAITVLRQYGFTGKVGTMIELPSAYFDLSSILETGISKIVVGMNDLTSFVFATMRNSQWHDMESPIMLDMLRDMQDKARKNKINFAVAGYLNTSFIQKMNQLGIKCIIHYSSIPEIFDLEIDHPDHLKHIKEESKKLQRSTHDTARNVE

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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