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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 11-FEB-2025

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae INV104
  • locus tag: INV104_RS03045 [old locus tag: INV104_05200 ]
  • pan locus tag?: PNEUPAN001516000
  • symbol: pepV
  • pan gene symbol?: pepV
  • synonym:
  • product: dipeptidase PepV

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: INV104_RS03045 [old locus tag: INV104_05200 ]
  • symbol: pepV
  • product: dipeptidase PepV
  • replicon: chromosome
  • strand: +
  • coordinates: 580978..582378
  • length: 1401
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_017591 (580978..582378) NCBI
  • BioCyc: INV104_RS03045 BioCyc
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_0542 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGATAGCAATTGATTTTACAGCAGAAGTAGAAAAACGCAAAGAAGACCTCTTGGCTGAC
    TTGTTTAGCCTTTTGGAAATCAACTCAGAACGTGATGATAGCAAGGCTGATGCCCAACAT
    CCATTTGGACCTGGTCCAGTAAAAGCCTTGGAAAAATTCCTTGAAATCGCAGACCGTGAT
    GGTTATCCAACTAAAAATGTTGATAACTATGCAGGACATTTTGAGTTTGGTGATGGAGAA
    GAAGTTCTCGGAATCTTTGCCCATATGGACGTGGTTCCAGCTGGTAGCGGTTGGGACACA
    GACCCTTACACACCAACTATCAAAGATGGTCGCCTTTATGCGCGTGGTGCTTCAGATGAC
    AAGGGACCTACAACAGCTTGCTACTATGGTTTGAAAATCATCAAAGAATTGGGCCTTCCA
    ACTTCTAAGAAAGTTCGCTTCATCGTTGGAACAGACGAAGAATCAGGCTGGGCAGATATG
    GACTACTACTTCGAGCACGTAGGACTCGCCAAGCCAGACTTTGGTTTCTCACCAGATGCT
    GAATTTCCAATCATCAATGGTGAAAAAGGAAACATCACGGAATACCTCCACTTTGCAGGT
    GAAAATACAGGTGCAGCCCGTCTTCACAGCTTTACAGGTGGTTTACGTGAAAATATGGTA
    CCAGAATCAGCAACAGCAGTCGTTTCAGGTGACTTGACAGACTTGCAAGCTAAACTAGAT
    GCCTTTGTTGCAGAACACAAACTTAGAGGAGAACTCCAAGAAGAAGCTGGCCAATACAAG
    GTGACGATCATTGGTAAATCAGCCCACGGTGCTATGCCTGCTTCAGGTGTCAATGGCGCA
    ACTTACCTTGCCCTCTTCCTCAGCCAGTTTGGCTTTGCTGGTCCAGCCAAAGACTACCTT
    GACATCGCAGGTAAAATTCTCTTGAACGATCATGAGGGTGAAAATCTCAAGATTGCTCAT
    GTGGATGAAAAGATGGGTGCTCTTTCTATGAATGCCGGCGTCTTCCGCTTCGATGAAACA
    AGTGCTGATAATACCATTGCCCTTAACATCCGCTATCCAAAAGGAACAAGTCCAGAACAA
    ATCAAGTCAATCCTAGAAAACTTGCCAGTTGCTTCTGTCAGTCTATCAGAACATGGTCAT
    ACCCCTCACTATGTGCCAATGGAAGATCCACTTGTGCAAACCTTGTTGAATGTCTATGAA
    AAACAAACAGGCCTTAAAGGTCATGAACAAGTCATCGGTGGTGGAACCTTTGGTCGCTTG
    TTAGAGCGCGGAGTTGCCTATGGTGCTATGTTCCCAGACTCAATTGATACCATGCACCAA
    GCCAATGAATTTATTGCCTTGGACGATCTCTTCCGAGCAGCAGCAATTTATGCCGAAGCT
    ATTTACGAATTGATCAAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1401

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: INV104_RS03045 [old locus tag: INV104_05200 ]
  • symbol: PepV
  • description: dipeptidase PepV
  • length: 466
  • theoretical pI: 4.52622
  • theoretical MW: 50779.6
  • GRAVY: -0.256223

⊟Function[edit | edit source]

  • reaction:
    EC 3.4.13.-?  ExPASy
  • TIGRFAM:
    Genetic information processing Protein fate Degradation of proteins, peptides, and glycopeptides dipeptidase PepV (TIGR01886; EC 3.4.13.-; HMM-score: 732.3)
    and 9 more
    putative dipeptidase (TIGR01887; EC 3.4.13.-; HMM-score: 578.7)
    Genetic information processing Protein fate Degradation of proteins, peptides, and glycopeptides peptidase, ArgE/DapE family (TIGR01910; EC 3.4.-.-; HMM-score: 124.8)
    Metabolism Amino acid biosynthesis Glutamate family acetylornithine deacetylase (ArgE) (TIGR01892; EC 3.5.1.16; HMM-score: 72)
    Metabolism Amino acid biosynthesis Aspartate family succinyl-diaminopimelate desuccinylase (TIGR01246; EC 3.5.1.18; HMM-score: 65.3)
    putative selenium metabolism hydrolase (TIGR03526; HMM-score: 59.4)
    N-acyl-L-amino-acid amidohydrolase (TIGR01880; EC 3.5.1.14; HMM-score: 30.2)
    N-acetyl-ornithine/N-acetyl-lysine deacetylase (TIGR01902; HMM-score: 26.9)
    Metabolism Amino acid biosynthesis Aspartate family succinyl-diaminopimelate desuccinylase (TIGR01900; EC 3.5.1.18; HMM-score: 23.2)
    Genetic information processing Protein fate Degradation of proteins, peptides, and glycopeptides amidohydrolase (TIGR01891; HMM-score: 12.1)
  • TheSEED: see INV104_05200
  • PFAM:
    Peptidase_MH (CL0035) Peptidase_M20; Peptidase family M20/M25/M40 (PF01546; HMM-score: 110.9)
    and 2 more
    no clan defined M20_dimer; Peptidase dimerisation domain (PF07687; HMM-score: 20)
    Peptidase_MH (CL0035) Peptidase_M28; Peptidase family M28 (PF04389; HMM-score: 15)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.993
    • Cytoplasmic Membrane Score: 0.0012
    • Cell wall & surface Score: 0.0002
    • Extracellular Score: 0.0055
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.007541
    • TAT(Tat/SPI): 0.000883
    • LIPO(Sec/SPII): 0.001371
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_000560282 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MIAIDFTAEVEKRKEDLLADLFSLLEINSERDDSKADAQHPFGPGPVKALEKFLEIADRDGYPTKNVDNYAGHFEFGDGEEVLGIFAHMDVVPAGSGWDTDPYTPTIKDGRLYARGASDDKGPTTACYYGLKIIKELGLPTSKKVRFIVGTDEESGWADMDYYFEHVGLAKPDFGFSPDAEFPIINGEKGNITEYLHFAGENTGAARLHSFTGGLRENMVPESATAVVSGDLTDLQAKLDAFVAEHKLRGELQEEAGQYKVTIIGKSAHGAMPASGVNGATYLALFLSQFGFAGPAKDYLDIAGKILLNDHEGENLKIAHVDEKMGALSMNAGVFRFDETSADNTIALNIRYPKGTSPEQIKSILENLPVASVSLSEHGHTPHYVPMEDPLVQTLLNVYEKQTGLKGHEQVIGGGTFGRLLERGVAYGAMFPDSIDTMHQANEFIALDDLFRAAAIYAEAIYELIK

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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