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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001516000
- symbol?: pepV
- synonym:
- description?: dipeptidase PepV
- dipeptidase PepV
- putative Xaa-His dipeptidase
- Beta-Ala-Xaa dipeptidase
- dipeptidase
- peptidase M20 superfamily
- Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
- Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-like deacylases
- peptidase M20 superfamily protein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1937146..1938546
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
(12F)
ASP0581:
EL334_RS03135 (pepV)
(19F)
ATCC 49619:
EL263_RS03075 (pepV)
(23F)
ATCC 700669:
SPN23F_RS02870 (pepV)
(14)
INV200:
SPNINV200_RS02935 (pepV)
(14)
JJA:
SPJ_RS02875 (pepV)
(19F)
MDRSPN001:
MDRSPN_RS07490 (pepV)
(19A)
SP49:
BMJ42_RS03625 (pepV)
(1)
SPN032672:
SPN032672_RS09315 (pepV)
(3)
SPN034156:
SPN034156_RS08980 (pepV)
(3)
SPN034183:
SPN034183_RS03070 (pepV)
(3)
SPN994038:
SPN994038_RS02990 (pepV)
(3)
SPN994039:
SPN994039_RS02990 (pepV)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MTAIDFTAEVEKRKEDLLADLFSLLEINSERDDSKADAQHPFGPGPVKALEKFLEIADRD
D39 MIAIDFTAEVEKRKEDLLADLFSLLEINSERDDSKADAQHPFGPGPVKALEKFLEIADRD
D39V MIAIDFTAEVEKRKEDLLADLFSLLEINSERDDSKADAQHPFGPGPVKALEKFLEIADRD
Hungary19A-6 MIAIDFTAEVEKRKEDLLADLFSLLEINSERDDSKADAQHPFGPGPVKALEKFLEIADRD
EF3030 MTAIDFTAEVEKRKEDLLADLFSLLEINSERDDSKADAQHPFGPGPVKALEKFLEIADRD
* **********************************************************
TIGR4 GYPTKNVDNYAGHFEFGDGEEVLGIFAHMDVVPAGSGWDTDPYTPTIKDGRLYARGASDD
D39 GYPTKNVDNYAGHFEFGDGEEVLGIFAHMDVVPAGSGWDTDPYTPTIKDGRLYARGASDD
D39V GYPTKNVDNYAGHFEFGDGEEVLGIFAHMDVVPAGSGWDTDPYTPTIKDGRLYARGASDD
Hungary19A-6 GYPTKNVDNYAGHFEFGDGEEVLGIFAHMDVVPAGSGWDTDPYTPTIKDGRLYARGASDD
EF3030 GYPTKNVDNYAGHFEFGDGEEVLGIFAHMDVVPAGSGWDTDPYTPTIKDGRLYARGASDD
************************************************************
TIGR4 KGPTTACYYGLKIIKELGLPTSKKVRFIVGTDEESGWADMDYYFEHVGLAKPDFGFSPDA
D39 KGPTTACYYGLKIIKELGLPTSKKVRFIVGTDEESGWADMDYYFEHVGLAKPDFGFSPDA
D39V KGPTTACYYGLKIIKELGLPTSKKVRFIVGTDEESGWADMDYYFEHVGLAKPDFGFSPDA
Hungary19A-6 KGPTTACYYGLKIIKELGLPTSKKVRFIVGTDEESGWADMDYYFEHVGLAKPDFGFSPDA
EF3030 KGPTTACYYGLKIIKELGLPTSKKVRFIVGTDEESGWADMDYYFEHVGLAKPDFGFSPDA
************************************************************
TIGR4 EFPIINGEKGNITEYLHFAGENTGVARLHSFTGGLRENMVPESATAVVSGDLADLQAKLD
D39 EFPIINGEKGNITEYLHFAGENTGAARLHSFTGGLRENMVPESATAVVSGDLADLQAKLD
D39V EFPIINGEKGNITEYLHFAGENTGAARLHSFTGGLRENMVPESATAVVSGDLADLQAKLD
Hungary19A-6 EFPIINGEKGNITEYLHFAGENTGAARLHSFTGGLRENMVPESATAVVSGDLADLQAKLD
EF3030 EFPIINGEKGNITEYLHFAGENTGVARLHSFTGGLRENMVPESATAVVSGDLADLQAKLD
************************.***********************************
TIGR4 AFVAEHKLRGELQEEAGKYKVTIIGKSAHGAMPASGVNGATYLALFLSQFGFAGPAKDYL
D39 AFVAEHKLRGELQEEAGKYKVTIIGKSAHGAMPASGVNGATYLALFLSQFGFAGPAKDYL
D39V AFVAEHKLRGELQEEAGKYKVTIIGKSAHGAMPASGVNGATYLALFLSQFGFAGPAKDYL
Hungary19A-6 AFVAEHKLRGELQEEAGKYKVTIIGKSAHGAMPASGVNGATYLALFLSQFGFAGPAKDYL
EF3030 AFVAEHKLRGELQEEAGKYKVTIIGKSAHGAMPASGVNGATYLALFLSQFGFAGPAKDYL
************************************************************
TIGR4 DIAGKILLNDHEGENLKIAHVDEKMGALSMNAGVFHFDETSADNTIALNIRYPKGTSPEQ
D39 DIAGKILLNDHEGENLKIAHVDEKMGALSMNAGVFRFDETSADNTIALNIRYPKGTSPEQ
D39V DIAGKILLNDHEGENLKIAHVDEKMGALSMNAGVFRFDETSADNTIALNIRYPKGTSPEQ
Hungary19A-6 DIAGKILLNDHEGENLKIAHVDEKMGALSMNAGVFRFDETSADNTIALNIRYPKGTSPEQ
EF3030 DIAGKILLNDHEGENLKIAHVDEKMGALSMNAGVFRFDETSADNTIALNIRYPKGTSPEQ
***********************************:************************
TIGR4 IKSILENLPVVSVSLSEHGHTPHYVPMEDPLVQTLLNIYEKQTGFKGHEQVIGGGTFGRL
D39 IKSILENLPVASVSLSEHGHTPHYVPMEDPLVQTLLNVYEKQTGLQGHEQVIGGGTFGRL
D39V IKSILENLPVASVSLSEHGHTPHYVPMEDPLVQTLLNVYEKQTGLQGHEQVIGGGTFGRL
Hungary19A-6 IKSILENLPVASVSLSEHGHTPHYVPMEDPLVQTLLNVYEKQTGLQGHEQVIGGGTFGRL
EF3030 IKSILENLPVVSVSLSEHGHTPHYVPMEDPLVQTLLNIYEKQTGLKGHEQVIGGGTFGRL
**********.**************************:******::**************
TIGR4 LERGVAYGAMFPDSIDTMHQANEFIALDDLFRAAAIYAEAIYELIK
D39 LERGVAYGAMFPDSIDTMHQANEFIALDDLFRAAAIYAEAIYELIK
D39V LERGVAYGAMFPDSIDTMHQANEFIALDDLFRAAAIYAEAIYELIK
Hungary19A-6 LERGVAYGAMFPDSIDTMHQANEFIALDDLFRAAAIYAEAIYELIK
EF3030 LERGVAYGAMFPDSIDTMHQANEFIALDDLFRAAAIYAEAIYELIK
**********************************************