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JJA
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serotype 1

NCBI: 03-AUG-2015

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae ST556
  • locus tag: MYY_0792 [new locus tag: MYY_RS04060 ]
  • pan locus tag?: PNEUPAN001720000
  • symbol: MYY_0792
  • pan gene symbol?: malT
  • synonym:
  • product: PTS system glucose/maltose-specific transporter subunit IIBCA

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: MYY_0792 [new locus tag: MYY_RS04060 ]
  • symbol: MYY_0792
  • product: PTS system glucose/maltose-specific transporter subunit IIBCA
  • replicon: chromosome
  • strand: +
  • coordinates: 770978..773155
  • length: 2178
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    ATGAAAGATACATTCAAAAATGTCTTGTCTTTCGAATTTTGGCAAAAATTCGGTAAGGCT
    TTGATGGTAGTTATCGCGGTTATGCCGGCTGCTGGTTTGATGATTTCAATCGGTAAGTCT
    ATCGTGATGATTAACCCAACCTTTACACCACTTGTCATCACAGGTGGAATTCTTGAGCAA
    ATCGGTTGGGGGGTTATCGGTAACCTTCACATTTTGTTTGCCCTAGCCATTGGAGGAAGC
    TGGGCTAAAGAACGTGCTGGTGGTGCTTTCGCCGCTGGTCTTGCCTTCATCTTGATTAAC
    CGTATCACTGGTACAATTTTTGGTGTATCAGGCGATATGTTGAAAAATCCAGATGCTATG
    GTAACTACTTTCTTTGGTGGTTCAATCAAAGTTGCTGATTACTTTATCAGTGTTCTTGAA
    GCTCCAGCCTTGAACATGGGGGTATTCGTAGGGATTATCTCAGGTTTTGTAGGGGCAACT
    GCTTACAACAAATACTACAACTTCCGTAAACTTCCTGATGCACTTTCATTCTTCAACGGG
    AAACGTTTCGTACCATTTGTAGTTATTCTTCGTTCAGCAATCGCTGCAATTCTACTTGCT
    GCTTTCTGGCCAGTAGTTCAAACAGGTATCAATAACTTCGGTATCTGGATTGCCAACTCA
    CAAGAAACTGCTCCAATTCTTGCACCATTCTTGTATGGTACTTTGGAACGTTTGCTCTTG
    CCATTTGGTCTTCACCACATGTTGACTATCCCAATGAACTACACAGCTCTTGGTGGTACT
    TATGACATTTTAACTGGTGCAGCTAAAGGTACTCAAGTATTCGGTCAAGACCCACTATGG
    CTTGCATGGGTAACAGACCTTGTAAACCTTAAAGGTACTGATGCTAGTCAATACCAACAC
    TTGTTAGATACAGTACATCCAGCTCGTTTCAAAGTTGGACAAATGATCGGTTCATTCGGT
    ATCTTGATGGGTGTGATTGTTGCTATCTACCGTAATGTTGATGCTGACAAGAAACATAAA
    TACAAAGGTATGATGATTGCAACAGCTCTTGCAACATTCTTGACAGGGGTTACTGAACCA
    ATCGAATACATGTTCATGTTCATCGCAACACCTATGTATCTTGTTTACTCACTTGTTCAA
    GGTGCTGCCTTCGCTATGGCTGACGTCGTAAACCTACGTATGCACTCATTCGGTTCAATC
    GAGTTCTTGACTCGTACACCTATTGCAATCAGTGCTGGTATTGGTATGGATATCGTTAAC
    TTCGTTTGGGTAACTGTTCTCTTTGCTGTAATCATGTACTTTATCGCAAACTTCATGATT
    CAAAAATTCAACTACGCAACTCCAGGGCGCAACGGAAACTACGAAACTGCTGAAGGTTCA
    GAAGAAACCAGCAGCGAAGTGAAAGTTGCAGCAGGCTCTCAAGCTGTAAACATTATCAAC
    CTTCTTGGTGGACGTGTAAACATCGTTGATGTTGATGCATGTATGACTCGTCTTCGTGTA
    ACTGTTAAAGATGCAGATAAAGTAGGAAATGCAGAGCAATGGAAAGCAGAAGGAGCTATG
    GGTCTTGTGATGAAAGGACAAGGGGTTCAAGCTATCTACGGTCCAAAAGCTGACATTTTG
    AAATCTGATATCCAAGATATCCTTGATTCAGGTGAAATCATTCCTGAAACTCTTCCAAGC
    CAAATGACTGAAGCACAACAAAACACTGTTCACTTCAAAGATCTTACTGAGGAAGTTTAC
    TCAGTAGCAGACGGTCAAGTTGTTGCTTTGGAACAAGTAAAGGATCCAGTATTTGCTCAA
    AAAATGATGGGTGATGGATTTGCAGTAGAACCTGCAAATGGAAACATTGTATCTCCAGTT
    TCAGGTACTGTATCAAGCATCTTCCCAACAAAACATGCTTTTGGTATTGTGACGGAAGCA
    GGTCTTGAAGTATTGGTTCACATTGGTTTGGACACAGTAAGTCTTGAAGGTAAACCATTT
    ACAGTTCATGTTGCTGAAGGACAAAAAGTTGCAGCAGGAGATCTCCTTGTCACAGCTGAC
    TTGAATGCTATCCGTGCAGCAGGACGTGAAACTTCAACAGTAGTTGTCTTCACAAATGGT
    GATGCAATTAAATCAGTTAAATTAGAAAAAACAGGTTCTCTTGCAGCTAAAACAGCAGTT
    GCTAAAGTAGAATTGTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1560
    1620
    1680
    1740
    1800
    1860
    1920
    1980
    2040
    2100
    2160
    2178

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: MYY_0792 [new locus tag: MYY_RS04060 ]
  • symbol: MYY_0792
  • description: PTS system glucose/maltose-specific transporter subunit IIBCA
  • length: 725
  • theoretical pI: 6.30565
  • theoretical MW: 77892.3
  • GRAVY: 0.430897

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids PTS system, IIBC component (TIGR02003; EC 2.7.1.69; HMM-score: 944.3)
    and 14 more
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids PTS system, glucose-specific IIBC component (TIGR02002; EC 2.7.1.69; HMM-score: 319.9)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids PTS system, N-acetylglucosamine-specific IIBC component (TIGR01998; EC 2.7.1.69; HMM-score: 286.6)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids PTS system, maltose and glucose-specific IIBC component (TIGR02004; EC 2.7.1.69; HMM-score: 218.9)
    PTS system, beta-glucoside-specific IIABC component (TIGR01995; EC 2.7.1.69; HMM-score: 198.7)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids PTS system, alpha-glucoside-specific IIBC component (TIGR02005; EC 2.7.1.69; HMM-score: 162.3)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids PTS system, glucose subfamily, IIA component (TIGR00830; HMM-score: 145)
    Signal transduction Signal transduction PTS PTS system, glucose subfamily, IIA component (TIGR00830; HMM-score: 145)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids PTS system, maltose and glucose-specific subfamily, IIC component (TIGR00852; HMM-score: 105.1)
    Signal transduction Signal transduction PTS PTS system, maltose and glucose-specific subfamily, IIC component (TIGR00852; HMM-score: 105.1)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids PTS system, glucose-like IIB component (TIGR00826; EC 2.7.1.69; HMM-score: 59.4)
    Signal transduction Signal transduction PTS PTS system, glucose-like IIB component (TIGR00826; EC 2.7.1.69; HMM-score: 59.4)
    PTS system, sucrose-specific IIBC component (TIGR01996; EC 2.7.1.69; HMM-score: 30.5)
    PTS system, trehalose-specific IIBC component (TIGR01992; EC 2.7.1.69; HMM-score: 20.5)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking type I secretion membrane fusion protein, HlyD family (TIGR01843; HMM-score: 12.4)
  • TheSEED  :
    • PTS system, maltose and glucose-specific IIA component (EC 2.7.1.69)
    • PTS system, maltose and glucose-specific IIB component (EC 2.7.1.69)
    • PTS system, maltose and glucose-specific IIC component (EC 2.7.1.69)
    Carbohydrates Di- and oligosaccharides Maltose and Maltodextrin Utilization  PTS system, maltose and glucose-specific IIA component (EC 2.7.1.69)
    and 2 more
    Carbohydrates Di- and oligosaccharides Maltose and Maltodextrin Utilization  PTS system, maltose and glucose-specific IIB component (EC 2.7.1.69)
    Carbohydrates Di- and oligosaccharides Maltose and Maltodextrin Utilization  PTS system, maltose and glucose-specific IIC component (EC 2.7.1.69)
  • PFAM:
    Hybrid (CL0105) PTS_EIIA_1; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 (PF00358; HMM-score: 172.4)
    PTS_EIIC (CL0493) PTS_EIIC; Phosphotransferase system, EIIC (PF02378; HMM-score: 168.5)
    and 4 more
    no clan defined PTS_EIIB; phosphotransferase system, EIIB (PF00367; HMM-score: 50.9)
    Hybrid (CL0105) Biotin_lipoyl_2; Biotin-lipoyl like (PF13533; HMM-score: 15.9)
    Peptidase_M23; Peptidase family M23 (PF01551; HMM-score: 14.3)
    no clan defined DUF6256; Family of unknown function (DUF6256) (PF19770; HMM-score: 13.3)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 8
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.096404
    • TAT(Tat/SPI): 0.003183
    • LIPO(Sec/SPII): 0.017977
  • predicted transmembrane helices (TMHMM): 9

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: AFC94453 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MKDTFKNVLSFEFWQKFGKALMVVIAVMPAAGLMISIGKSIVMINPTFTPLVITGGILEQIGWGVIGNLHILFALAIGGSWAKERAGGAFAAGLAFILINRITGTIFGVSGDMLKNPDAMVTTFFGGSIKVADYFISVLEAPALNMGVFVGIISGFVGATAYNKYYNFRKLPDALSFFNGKRFVPFVVILRSAIAAILLAAFWPVVQTGINNFGIWIANSQETAPILAPFLYGTLERLLLPFGLHHMLTIPMNYTALGGTYDILTGAAKGTQVFGQDPLWLAWVTDLVNLKGTDASQYQHLLDTVHPARFKVGQMIGSFGILMGVIVAIYRNVDADKKHKYKGMMIATALATFLTGVTEPIEYMFMFIATPMYLVYSLVQGAAFAMADVVNLRMHSFGSIEFLTRTPIAISAGIGMDIVNFVWVTVLFAVIMYFIANFMIQKFNYATPGRNGNYETAEGSEETSSEVKVAAGSQAVNIINLLGGRVNIVDVDACMTRLRVTVKDADKVGNAEQWKAEGAMGLVMKGQGVQAIYGPKADILKSDIQDILDSGEIIPETLPSQMTEAQQNTVHFKDLTEEVYSVADGQVVALEQVKDPVFAQKMMGDGFAVEPANGNIVSPVSGTVSSIFPTKHAFGIVTEAGLEVLVHIGLDTVSLEGKPFTVHVAEGQKVAAGDLLVTADLNAIRAAGRETSTVVVFTNGDAIKSVKLEKTGSLAAKTAVAKVEL

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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