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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000103000
- symbol?: cps2M
- synonym:
- description?: dTDP-4-dehydrorhamnose 3, 5-epimerase family protein
- dTDP-4-dehydrorhamnose 3, 5-epimerase family protein
- dTDP-4-dehydrorhamnose 3,5-epimerase
- dTDP-4-keto-6-deoxyglucose-3,5-epimerase rmlC
- putative dTDP-4-dehydrorhamnose 3,5-epimerase
- dTDP-4-dehydrorhamnose 3%2C5-epimerase
- dTDP-4-dehydrorhamnose 3,5-epimerase, putative
- dTDP-4-dehydrorhamnose 3,5-epimerase Cps2M
- dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC
- Protein RmlC
- The type 2 capsule locus of Streptococcus pneumoniae
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 85077..85673
- occurrence?: in 60% of 43 strains
⊟Orthologs[edit | edit source]
(3)
SPN034183:
—
(3)
SPN994038:
—
(3)
SPN994039:
—
⊟Genome Viewer[edit | edit source]
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
D39 MTDNFFGKILAVRKIDAIPGMLEFDIPVHGDNRGWFKENFQKEKMEPLGFPESFFAEGKL
D39V MTDNFFGKILAVRKIDAIPGMLEFDIPVHGDNRGWFKENFQKEKMEPLGFPESFFAEGKL
Hungary19A-6 MSDNFFGKTLVVRKIDAIPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAAGKL
EF3030 MTDNFFGKTLAARKVEAIPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKL
*:****** *..**::****:************************ ********** ***
D39 QNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLGSWVDLREGETFGNTYQTIIDASKGIF
D39V QNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLGSWVDLREGETFGNTYQTIIDASKGIF
Hungary19A-6 QNNVSFSRKNVLRGLHAEPWDKYISVADDGKVLGSWVDLREGETFGNVYQTEIDASKGIF
EF3030 QNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASKGIF
****************************.******************.*** ********
D39 VPRGVANGFQVLSDTVSYSYLVNDYWALELKPKYAFVNYADPSLGIEWENIAEAEVSEAD
D39V VPRGVANGFQVLSDTVSYSYLVNDYWALELKPKYAFVNYADPSLGIEWENIAEAEVSEAD
Hungary19A-6 VPRGVANGFQVLSDTVSYSYLVNDYWALELKPKYAFVNYADPALGIEWENLAEAEVSEAD
EF3030 VPRGVANGFQVLSDTVSYSYLVNDYWALELKPKYAFVNYADPSLGIEWENIAEAEVSEAD
******************************************:*******:*********
D39 KHHPLLKDVKPLKKEDL-
D39V KHHPLLKDVKPLKKEDL-
Hungary19A-6 KHHPLLRDVKPLTKDEL-
EF3030 KHHPLLKDVKPLKKEDLE
******:*****.*::*