PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN000169000
• symbol^?: dnaN
• synonym:
• description^?: DNA polymerase III subunit beta

  descriptions from strain specific annotations:

  • DNA polymerase III subunit beta
  • DNA polymerase III, beta subunit
  • DNA polymerase III, beta chain
  • DNA polymerase III beta subunit
  • Beta sliding clamp
  • DNA biosynthesis; sliding clamp subunit, required for high processivity; DNA polymerase III beta-subunit
  • DNA polymerase III%2C beta subunit
  • DNA polymerase sliding clamp subunit
• strand^?: +
• coordinates^?: 152118..153254
• occurrence^?: in 100% of 43 strains

⊟Orthologs

TIGR4:
SP_RS00010 (dnaN)
D39:
SPD_RS00010 (dnaN)
D39V:
SPV_RS00010 (dnaN)
Hungary19A-6:
SPH_RS00010 (dnaN)
EF3030:
EF3030_RS00010 (dnaN)
670-6B:
SP670_RS00010 (dnaN)
6A-10:
HKM25_RS00010 (dnaN)
70585:
SP70585_RS00040 (dnaN)
A026:
T308_RS10980 (dnaN)
A66:
A66_RS00045 (dnaN)
AP200:
SPAP_RS00010 (dnaN)
ASP0581:
EL334_RS00010 (dnaN)
ATCC 49619:
EL263_RS00010 (dnaN)
ATCC 700669:
SPN23F_RS00010 (dnaN)
BM6001:
ODS73_RS00010 (dnaN)
BVJ1JL:
JN057_RS00010 (dnaN)
CGSP14:
SPCG_RS00010 (dnaN)
G54:
SPG_RS00010 (dnaN)
gamPNI0373:
HMPREF1038_RS00015 (dnaN)
HU-OH:
EL271_RS00010 (dnaN)
Hu15:
SPNHU15_RS00010 (dnaN)
Hu17:
SPNHU17_RS00010 (dnaN)
INV104:
INV104_RS00010 (dnaN)
INV200:
SPNINV200_RS00010 (dnaN)
JJA:
SPJ_RS00010 (dnaN)
MDRSPN001:
MDRSPN_RS00010 (dnaN)
NCTC7465:
AT689_RS02660 (dnaN)
NCTC7466:
DQM66_RS00010 (dnaN)
NU83127:
EL277_RS00010 (dnaN)
OXC141:
SPNOXC_RS00010 (dnaN)
P1031:
SPP_RS00010 (dnaN)
R6:
SPR_RS00010 (dnaN)
SP49:
BMJ42_RS00010 (dnaN)
SPN032672:
SPN032672_RS04465 (dnaN)
SPN034156:
SPN034156_RS05985 (dnaN)
SPN034183:
SPN034183_RS00010 (dnaN)
SPN994038:
SPN994038_RS00010 (dnaN)
SPN994039:
SPN994039_RS00010 (dnaN)
SPNA45:
SPNA45_RS00010 (dnaN)
ST556:
MYY_RS00010 (dnaN)
Taiwan19F-14:
SPT_RS00040 (dnaN)
TCH8431/19A:
HMPREF0837_RS01315 (dnaN)
Xen35:
CXP32_RS00010 (dnaN)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MIHFSINKNLFLQALNTTKRAISSKNAIPILSTVKIDVTNEGITLIGSNGQISIENFISQ
  D39             MIHFSINKNLFLQALNITKRAISSKNAIPILSTVKIDVTNEGVTLIGSNGQISIENFISQ
  D39V            MIHFSINKNLFLQALNITKRAISSKNAIPILSTVKIDVTNEGVTLIGSNGQISIENFISQ
  Hungary19A-6    MIHFSINKNLFLQALNTTKRAISSKNAIPILSTVKIDVTNEGITLIGSNGQISIENFISQ
  EF3030          MIHFSINKNLFLQALNTTKRAISSKNAIPILSTIKIDVTNEGITLIGSNGQISIENFISQ
                  **************** ****************:********:*****************
  
  TIGR4           KNEDAGLLITSLGSILLEASFFINVVSSLPDVTLDFKEIEQNQIVLTSGKSEITLKGKDS
  D39             KNEDAGLLITSLGSILLEASFFINVVSSLPDVTLDFKEIEQNQIVLTSGKSEITLKGKDS
  D39V            KNEDAGLLITSLGSILLEASFFINVVSSLPDVTLDFKEIEQNQIVLTSGKSEITLKGKDS
  Hungary19A-6    KNEDAGLLITSLGSILLEASFFINVVSSLPDVTLDFKEIEQNQIVLTSGKSEITLKGKDS
  EF3030          KNEDAGLLITSLGSILLEASFFINVVSSLPDVTLDFKEIEQNQIVLTSGKSEITLKGKDS
                  ************************************************************
  
  TIGR4           EQYPRIQEISASTPLILETKLLKKIINETAFAASTQESRPILTGVHFVLSQHKELKTVAT
  D39             EQYPRIQEISASTPLILETKLLKKIINETAFAASTQESRPILTGVHFVLSQHKELKTVAT
  D39V            EQYPRIQEISASTPLILETKLLKKIINETAFAASTQESRPILTGVHFVLSQHKELKTVAT
  Hungary19A-6    EQYPRIQEISASTPLILETKLLKKIINETAFAASTQESRPILTGVHFVLSQHKELKTVAT
  EF3030          EQYPRIQEISASTPLILETKLLKKIINETAFAASTQESRPILTGVHFVLSQHKELKTVAT
                  ************************************************************
  
  TIGR4           DSHRLSQKKLTLEKNSDDFDVVIPSRSLREFSAVFTDDIETVEIFFANNQILFRSENISF
  D39             DSHRLSQKKLTLEKNSDDFDVVIPSRSLREFSAVFTDDIETVEIFFANNQILFRSENISF
  D39V            DSHRLSQKKLTLEKNSDDFDVVIPSRSLREFSAVFTDDIETVEIFFANNQILFRSENISF
  Hungary19A-6    DSHRLSQKKLTLEKNSDDFDVVIPSRSLREFSAVFTDDIETVEIFFANNQILFRSENISF
  EF3030          DSHRLSQKKLTLEKNSDDFDVVIPSRSLREFSAVFTDDIETVEIFFANNQILFRSENISF
                  ************************************************************
  
  TIGR4           YTRLLEGNYPDTDRLIPTDFNTTITFNVVNLRQSMERARLLSSATQNGTVKLEIKDGVVS
  D39             YTRLLEGNYPDTDRLIPTDFNTTITFNVVNLRQSMERARLLSSATQNGTVKLEIKDGVVS
  D39V            YTRLLEGNYPDTDRLIPTDFNTTITFNVVNLRQSMERARLLSSATQNGTVKLEIKDGVVS
  Hungary19A-6    YTRLLEGNYPDTDRLIPTDFNTTITFNVVNLRQSMERARLLSSATQNGTVKLEIKDGVVS
  EF3030          YTRLLEGNYPDTDRLIPTDFNTTITFNVVNLRQSMERARLLSSATQNGTVKLEIKDGVVS
                  ************************************************************
  
  TIGR4           AHVHSPEVGKVNEEIDTDQVTGEDLTISFNPTYLIDSLKALNSEKVTISFISAVRPFTLV
  D39             AHVHSPEVGKVNEEIDTDQVTGEDLTISFNPTYLIDSLKALNSEKVTISFISAVRPFTLV
  D39V            AHVHSPEVGKVNEEIDTDQVTGEDLTISFNPTYLIDSLKALNSEKVTISFISAVRPFTLV
  Hungary19A-6    AHVHSPEVGKVNEEIDTDQVTGEDLTISFNPTYLIDSLKALNSEKVTISFISAVRPFTLV
  EF3030          AHVHSPEVGKVNEEIDTDQVTGEDLTISFNPTYLIDSLKALNSEKVTISFISAVRPFTLV
                  ************************************************************
  
  TIGR4           PADTDEDFMQLITPVRTN
  D39             PADTDEDFMQLITPVRTN
  D39V            PADTDEDFMQLITPVRTN
  Hungary19A-6    PADTDEDFMQLITPVRTN
  EF3030          PADTDEDFMQLITPVRTN
                  ******************