PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary[edit | edit source]

pan ID^?: PNEUPAN000354000
symbol^?: lmrA_1
synonym:
description^?: ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- drug efflux ABC transporter, ATP-binding/permease protein
- putative ABC transport ATP-binding protein
- ABC transporter ATP-binding/membrane spanning protein
- ABC transporter ATP-binding/membrane spanning protein - multidrug resistance
- ABC transporter family protein
- ABC-type multidrug transport system, ATPase and permease component
- drug efflux ABC transporter ATP-binding/permease protein
strand^?: -
coordinates^?: 346760..396
occurrence^?: in 28% of 43 strains

⊟Orthologs[edit | edit source]

(4)^?

TIGR4:

SP_RS12200

(2)

D39:

SPD_RS06295

(2)

D39V:

SPV_RS06290

(19A)

Hungary19A-6:

—

(19F)

EF3030:

—

(6B)^?

670-6B:

—

(6A)

6A-10:

HKM25_RS06220

(5)

70585:

SP70585_RS12600

(19F)

A026:

—

(3)

A66:

—

(11A)

AP200:

SPAP_RS12135

(12F)

ASP0581:

—

(19F)

ATCC 49619:

—

(23F)

ATCC 700669:

SPN23F_RS12340

(19F)

BM6001:

—

(1)

BVJ1JL:

—

(14)

CGSP14:

—

(19F)

G54:

—

(1)

gamPNI0373:

—

(3)

HU-OH:

—

(19A)

Hu15:

—

(19A)

Hu17:

—

(1)

INV104:

INV104_RS12160

(14)

INV200:

—

(14)

JJA:

—

(19F)

MDRSPN001:

—

(1)

NCTC7465:

—

(2)

NCTC7466:

DQM66_RS06295

(4)

NU83127:

—

(3)

OXC141:

—

(1)

P1031:

—

(2)

R6:

SPR_RS06005

(19A)

SP49:

—

(1)

SPN032672:

SPN032672_RS11580

(3)

SPN034156:

—

(3)

SPN034183:

—

(3)

SPN994038:

—

(3)

SPN994039:

—

(3)

SPNA45:

—

(19F)

ST556:

—

(19F)

Taiwan19F-14:

—

(19A)

TCH8431/19A:

—

(4)

Xen35:

CXP32_RS06650

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.505)

TIGR4           MNYLKFIKKTKLILMGILIFLSSFNGVLLSGIIVYAGSLNQTSSFSDVLRFGAISILGWS
D39             MNYLKFIKKTKLILMGILIFLSSFNGVLLSGIIVYAGSLNQTSSFSDVLRFGAISILGWS
D39V            MNYLKFIKKTKLILMGILIFLSSFNGVLLSGIIVYAGSLNQTSSFSDVLRFGAISILGWS
                ************************************************************

TIGR4           AIYISNYYLEVTEASITKDINVKIKQGYFREQYLSSEMVKDYSSIISVLSNDLRLIEENY
D39             AIYISNYYLEVTEASITKDINVKIKQGYFREQYLFSEMVKDYSSIISVLSNDLRLIEENY
D39V            AIYISNYYLEVTEASITKDINVKIKQGYFREQYLFSEMVKDYSSIISVLSNDLRLIEENY
                ********************************** *************************

TIGR4           FRQIFEIISSILLFIVSLSFMLYLNFLVSIIFIVLSALPIIVPVFMKKMLSNSANEYSNS
D39             FRQIFEIISSILLFIVSLSFMLYLNFLVSIIFIVLSALPIIVPVFMKKMLSNSANEYSNS
D39V            FRQIFEIISSILLFIVSLSFMLYLNFLVSIIFIVLSALPIIVPVFMKKMLSNSANEYSNS
                ************************************************************

TIGR4           NAEYTHIIKEIFNGFKTLKSYSVTKEIISLSDKKLDKLEDSTFNLKRSEVLSKLVAVLIS
D39             NAEYTHIIKEIFNGFKTLKSYSVTKEIISLSDKKLDKLEDSTFNLKRSEVLSKLVAVLIS
D39V            NAEYTHIIKEIFNGFKTLKSYSVTKEIISLSDKKLDKLEDSTFNLKRSEVLSKLVAVLIS
                ************************************************************

TIGR4           GFCFLVPLVVGCYFVIYHKSLSFSELIGIFLANDKVLGPIQSIAYSLNKINTTKDLRKPF
D39             GFCFLVPLVVGCYFVIYHKSLSFSELIGIFLANDKVLGPIQSIAYSLNKINTTKDLRKPF
D39V            GFCFLVPLVVGCYFVIYHKSLSFSELIGIFLANDKVLGPIQSIAYSLNKINTTKDLRKPF
                ************************************************************

TIGR4           LKYLSGEKNFIDAEHDNNGLYTSSIDEIHMKDVVYSITPENKLSIDFSFKSPFRVLLTGT
D39             LKYLSGEKNFVDAEHDNNGLYTSSIDEIHMKDVVYSITPENKLSIDFSFKSPFRVLLTGT
D39V            LKYLSGEKNFVDAEHDNNGLYTSSIDEIHMKDVVYSITPENKLSIDFSFKSPFRVLLTGT
                **********:*************************************************

TIGR4           SGSGKTTILNLINGSLKPQKGYVNLLSHGKKSSDSIPTVDQTPYIFDTTIRENVTLFQNE
D39             SGSGKTTILNLINGSLKPQKGYVNLLSHGKKSSDSIPTVDQTPYIFDTTIRENVTLFQNE
D39V            SGSGKTTILNLINGSLKPQKGYVNLLSHGKKSSDSIPTVDQTPYIFDTTIRENVTLFQNE
                ************************************************************

TIGR4           YFSDDQIIEVLKKVNLYEELEKIDILNYQCGENGSNLSGGQKQKIALARALIRNNKVYLF
D39             YFSDDQIIEVLKKVNLYEELEKIDILNYQCGENGSNLSGGQKQKIALARALIRNNKVYLF
D39V            YFSDDQIIEVLKKVNLYEELEKIDILNYQCGENGSNLSGGQKQKIALARALIRNNKVYLF
                ************************************************************

TIGR4           DEISANLDNDNSNSIHDILFNLGISFIEVSHHYDLNDKRYTDIYKLENGTLFKIK
D39             DEISANLDNDNSNSIHDILFNLGISFIEVSHHYDLNDKRYTDIYKLENGTLFKIK
D39V            DEISANLDNDNSNSIHDILFNLGISFIEVSHHYDLNDKRYTDIYKLENGTLFKIK
                *******************************************************

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]