Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000705000
- symbol?: cabP
- synonym:
- description?: potassium channel family protein
- potassium channel family protein
- potassium uptake protein, Trk family
- TrkA family cation transport protein
- Ktr system potassium uptake protein A
- potassium transporter Trk
- TrkA family potassium uptake protein
- Trk family potassium uptake protein
- K+ transport systems, NAD-binding component
- potassium uptake protein, Trk family protein
- trkA-N domain protein
- TrkA N-terminal domain protein
- Trk family potassium uptake protein CabP
- Trk system potassium uptake protein TrkA
- Trk transporter NAD+ binding protein
- Trk transporter NAD+ binding protein - K+ transport
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 822117..822782
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSDRTIGILGLGIFGSSVLAALAKQDMNIIAIDDHAERINQFEPVLARGVIGDITDEELL
D39 MSDRTIGILGLGIFGSSVLAALAKQDMNIIAIDDHAERINQFEPVLARGVIGDITDEELL
D39V MSDRTIGILGLGIFGSSVLAALAKQDMNIIAIDDHAERINQFEPVLARGVIGDITDEELL
Hungary19A-6 MSDRTIGILGLGIFGSSVLAALAKQDMNIIAIDDHAERINQFEPVLARGVIGDITDEELL
EF3030 MSDRTIGILGLGIFGSSVLAALAKQDMNIIAIDDHAERINQFEPVLARGVIGDITDEELL
************************************************************
TIGR4 RSAGIDTCDTVVVATGENLESSVLAVMHCKSLGVPTVIAKVKSQTAKKVLEKIGADSVIS
D39 RSAGIDTCDTVVVATGENLESSVLAVMHCKSLGVPTVIAKVKSQTAKKVLEKIGADSVIS
D39V RSAGIDTCDTVVVATGENLESSVLAVMHCKSLGVPTVIAKVKSQTAKKVLEKIGADSVIS
Hungary19A-6 RSAGIDTCDTVVVATGENLESSVLAVMHCKSLGVPTVIAKVKSQTAKKVLEKIGADSVIS
EF3030 RSAGIDTCDTVVVATGENLESSVLAVMHCKSLGVPTVIAKVKSQTAKKVLEKIGADSVIS
************************************************************
TIGR4 PEYEMGQSLAQTILFHNSVDVFQLDKNVSIVEMKIPQSWAGQSLSKLDLRGKYNLNILGF
D39 PEYEMGQSLAQTILFHNSVDVFQLDKNVSIVEMKIPQSWAGQSLSKLDLRGKYNLNILGF
D39V PEYEMGQSLAQTILFHNSVDVFQLDKNVSIVEMKIPQSWAGQSLSKLDLRGKYNLNILGF
Hungary19A-6 PEYEMGQSLAQTILFHNSVDVFQLDKNVSIVEMKIPQSWAGQSLSKLDLRGKYNLNILGF
EF3030 PEYEMGQSLAQTILFHNSVDVFQLDKNVSIVEMKIPQSWAGQSLSKLDLRGKYNLNILGF
************************************************************
TIGR4 REQENSPLDVEFGPDDLLKADTYILAVINNQYLDTLVALNS
D39 REQENSPLDVEFGPDDLLKADTYILAVINNQYLDTLVALNS
D39V REQENSPLDVEFGPDDLLKADTYILAVINNQYLDTLVALNS
Hungary19A-6 REQENSPLDVEFGPDDLLKADTYILAVINNQYLDTLVALNS
EF3030 REQENSPLDVEFGPDDLLKADTYILAVINNQYLDTLVALNS
*****************************************