PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN000751000
• symbol^?: sdhB
• synonym: sdaAB
• description^?: L-serine ammonia-lyase, iron-sulfur-dependent subunit beta

  descriptions from strain specific annotations:

  • L-serine ammonia-lyase, iron-sulfur-dependent subunit beta
  • L-serine dehydratase, iron-sulfur-dependent, beta subunit
  • putative L-serine dehydratase, beta chain
  • L-serine dehydratase, beta chain
  • L-serine dehydratase, iron-sulfur-dependent subunit beta
  • L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta
  • L-serine dehydratase, beta subunit
  • putative L-serine dehydratase beta subunit
  • L-serine deaminase
  • L-serine dehydratase beta subunit
  • serine dehydratase
  • serine dehydratase subunit beta
• strand^?: -
• coordinates^?: 870660..871331
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS00540 (sdaAB)
(2)
D39:
SPD_RS00550 (sdaAB)
(2)
D39V:
SPV_RS00550 (sdaAB)
(19A)
Hungary19A-6:
SPH_RS00990 (sdaAB)
(19F)
EF3030:
EF3030_RS00540 (sdaAB)
(6B)^?
670-6B:
SP670_RS00890 (sdaAB)
(6A)
6A-10:
HKM25_RS00630 (sdaAB)
(5)
70585:
SP70585_RS00820 (sdaAB)
(19F)
A026:
T308_RS00445 (sdaAB)
(3)
A66:
A66_RS00550 (sdaAB)
(11A)
AP200:
SPAP_RS00745 (sdaAB)
(12F)
ASP0581:
EL334_RS00600 (sdaAB)
(19F)
ATCC 49619:
EL263_RS00760 (sdaAB)
(23F)
ATCC 700669:
SPN23F_RS00600 (sdaAB)
(19F)
BM6001:
ODS73_RS00910 (sdaAB)
(1)
BVJ1JL:
JN057_RS00795 (sdaAB)
(14)
CGSP14:
SPCG_RS00540 (sdaAB)
(19F)
G54:
SPG_RS00515 (sdaAB)
(1)
gamPNI0373:
HMPREF1038_RS00810 (sdaAB)
(3)
HU-OH:
EL271_RS00550 (sdaAB)
(19A)
Hu15:
SPNHU15_RS08110 (sdaAB)
(19A)
Hu17:
SPNHU17_RS00740 (sdaAB)
(1)
INV104:
INV104_RS00520 (sdaAB)
(14)
INV200:
SPNINV200_RS00530 (sdaAB)
(14)
JJA:
SPJ_RS00640 (sdaAB)
(19F)
MDRSPN001:
MDRSPN_RS00560 (sdaAB)
(1)
NCTC7465:
AT689_RS01890 (sdaAB)
(2)
NCTC7466:
DQM66_RS00550 (sdaAB)
(4)
NU83127:
EL277_RS00540 (sdaAB)
(3)
OXC141:
SPNOXC_RS00760 (sdaAB)
(1)
P1031:
SPP_RS00800 (sdaAB)
(2)
R6:
SPR_RS00525 (sdaAB)
(19A)
SP49:
BMJ42_RS01100 (sdaAB)
(1)
SPN032672:
SPN032672_RS06795 (sdaAB)
(3)
SPN034156:
SPN034156_RS06740 (sdaAB)
(3)
SPN034183:
SPN034183_RS00755 (sdaAB)
(3)
SPN994038:
SPN994038_RS00760 (sdaAB)
(3)
SPN994039:
SPN994039_RS00755 (sdaAB)
(3)
SPNA45:
SPNA45_RS10765 (sdaAB)
(19F)
ST556:
MYY_RS00920 (sdaAB)
(19F)
Taiwan19F-14:
SPT_RS00710 (sdaAB)
(19A)
TCH8431/19A:
HMPREF0837_RS01985 (sdaAB)
(4)
Xen35:
CXP32_RS00555 (sdaAB)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDDTPTEVEFQLFNSFAKTYRG
  D39             MKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDDTPTEVEFQLFNSFAKTYRG
  D39V            MKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDDTPTEVEFQLFNSFAKTYRG
  Hungary19A-6    MKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDDTPTEVEFQLFNSFAKTYRG
  EF3030          MKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDDTPTEVEFQLFNSFAKTYRG
                  ************************************************************
  
  TIGR4           HGTDLALVAGILGMDTDDPEIPNSLEIAHKRGIKIVWTIQKDSNAPHPNTTKITVKNAHK
  D39             HGTDLALVAGILGMDTDDPEIPNSLEIAHKRGIKIVWTIQKDSNAPHPNTTKITVKNAHK
  D39V            HGTDLALVAGILGMDTDDPEIPNSLEIAHKRGIKIVWTIQKDSNAPHPNTTKITVKNAHK
  Hungary19A-6    HGTDLALVAGILGMNTDDPEIPNSLEIAHKRGIKIVWTIQKDSNAPHPNTTKITVKNAHK
  EF3030          HGTDLALVAGILGMDTDDPEIPNSLEIAHKRGIKIVWTIQKDSNAPHPNTTKITVKNAHK
                  **************:*********************************************
  
  TIGR4           TISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQ
  D39             TISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQ
  D39V            TISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQ
  Hungary19A-6    TISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQ
  EF3030          TISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQ
                  ************************************************************
  
  TIGR4           MNVTREKAGEKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK
  D39             MNVTREKAGEKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK
  D39V            MNVTREKAGEKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK
  Hungary19A-6    MNVTREKAGEKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK
  EF3030          MNVTREKAGEKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK
                  *******************************************