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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000870000
- symbol?: yesM
- synonym:
- description?: sensor histidine kinase
- sensor histidine kinase
- putative histidine sensor kinase
- sensor histidine kinase, putative
- Histidine kinase
- putative sensor histidine kinase
- putative sensor-like histidine kinase
- ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
- histidine kinase family protein
- Histidine kinase of two-component regulatory system 07, involved in response to glycocongjugated structures
- histidine kinase TCS07
- Predicted signal transduction protein with a C-terminal ATPase domain
- Two-component sensor kinase YesM
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1027312..1028982
- occurrence?: in 98% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKNWRQNRMKQFWLHTLLRTYSSVMIIIIASFAILLSYADWDSREKEAQRVAQRVTARTV
D39 MKNWRQNRMKQFWLHTLLRTYSSVMIIIIASFAILLSYADWDSREKEAQRVAQRVTARTV
D39V MKNWRQNRMKQFWLHTLLRTYSSVMIIIIASFAILLSYADWDSREKEAQRVAQRVTARTV
Hungary19A-6 MKNWRQNRMKQFWLHTLLRTYSSVMIIIIASFAILLSYADWDSREKEAQRVAQRVTARTV
EF3030 MKNWRQNRMKHFWLHTLLRTYSSVMIIIIASFAILLSYADWDSREKEAQRVAQRVTARTV
**********:*************************************************
TIGR4 SEIEYYHRESTQIAQALVENQARIEGIYKYFSLSMPDYFYWQLERKASPYISVSLYENVD
D39 SEIEYYHRESTQIAQALVENQARIEGIYKYFSLSMPDYFYWQLERKASPYISVSLYENVD
D39V SEIEYYHRESTQIAQALVENQARIEGIYKYFSLSMPDYFYWQLERKASPYISVSLYENVD
Hungary19A-6 SEIEYYHRESTQIAQALVENQARIEGIYKYFSLSMPDYFYWQLERKASPYISVSLYENVD
EF3030 SEIEYYHRESTQIAQALVENQARIEGIYKYFSLSMPDYFYWQLERKASPYISVSLYENVD
************************************************************
TIGR4 DLYVRNDFVTGVAIAFQDYKEVYVSTKDKRSGEKIRAEDFKPAGNSFAIPVSDPVSDQDL
D39 DLYVRNDFVTGVAIAFQDYKEVYVSTKDKRSGEKIRAEDFKPAGNSFAIPVSDPVSDQDL
D39V DLYVRNDFVTGVAIAFQDYKEVYVSTKDKRSGEKIRAEDFKPAGNSFAIPVSDPVSDQDL
Hungary19A-6 DLYVRNDFVTGVAIAFQDYKEVYVSTKDKRSGEKIRAEDFKPAGNSFAIPVSDPVSDQDL
EF3030 DLYVRNDFVTGVAIAFQDYKEVYVSTKDKRSGEKIRAEDFKPAGNSFAIPVSDPVSDQDL
************************************************************
TIGR4 GVIYISLDPAVLYHAIDNTRGHTPMAVTVTSPFDTEIFHMGETVDKESENWLVGLTSHGY
D39 GVIYISLDPAVLYHAIDNTRGHTPMAVTVTSPFDTEIFHIGETVDRESENWLVGLTSHGY
D39V GVIYISLDPAVLYHAIDNTRGHTPMAVTVTSPFDTEIFHIGETVDRESENWLVGLTSHGY
Hungary19A-6 GVIYISLDPAVLYHAIDNTRGHTPMAVTVTSPFDTEIFHMGETVDKESENWLVGLTSHGY
EF3030 GVIYISLDPAVLYHAIDNTRGNTPMAVTVTSPFDTEIFHIGETVDKESENWLVGLTSHGY
*********************:*****************:*****:**************
TIGR4 QVQVAVPKNFVLQGTVTSSALIVGLSLLFIVILYLTLRQTFANYQKQVVDLVESIQVIAQ
D39 QVQVAVPKNFVLQGTVTSSALIVGLSLLFIVILYLTLRQTFANYQKQVVDLVESIQVIAQ
D39V QVQVAVPKNFVLQGTVTSSALIVGLSLLFIVILYLTLRQTFANYQKQVVDLVESIQVIAQ
Hungary19A-6 QVQVAVPKNFVLQGTVTSSALIVGLSLLFIVILYLTLRQTFANYQKQVVDLVDSIQAIAQ
EF3030 QVQVAVPKNFVLQGTVTSSALIVGLSLLFIVILYLTLRQTFANYQKQVVDLVESIQVIAQ
****************************************************:***.***
TIGR4 GEEGRRIDISEKDQELLLIAETTNDMLDRLEKNIHDIYQLELSQKDANMRALQAQINPHF
D39 GEEGRRIDISEKDQELLLIAETTNDMLDRLEKNIHDIYQLELSQKDANMRALQAQINPHF
D39V GEEGRRIDISEKDQELLLIAETTNDMLDRLEKNIHDIYQLELSQKDANMRALQAQINPHF
Hungary19A-6 GQEGLRIDTLEKDQELLLIAETTNDMLDRLEKNIHDIYQLELSQKDANMRALQAQINPHF
EF3030 GEEGRRIDISEKDQELLLIAETTNDMLDRLEKNIHDIYQLELSQKDANMRALQAQINPHF
*:** *** **************************************************
TIGR4 MYNTLEFLRMYAVMQSQDELADIIYEFSSLLRNNISDERETLLKQELEFCRKYSYLCMVR
D39 MYNTLEFLRMYAVMQSQDELADIIYEFSSLLRNNISDERETLLKQELEFCRKYSYLCMVR
D39V MYNTLEFLRMYAVMQSQDELADIIYEFSSLLRNNISDERETLLKQELEFCRKYSYLCMVR
Hungary19A-6 MYNTLEFLRMYAVMQSQDELADIIYEFSSLLRNNISDERETLLKQELEFCRKYSYLCMVR
EF3030 MYNTLEFLRMYAVMQSQDELADIIYEFSSLLRNNISDERETLLKHELEFCRKYSYLCMVR
********************************************:***************
TIGR4 YPKSIAYGFKIDPELENMKIPKFTLQPLVENYFAHGVDHRRTDNVISIKALKQDGFVEIL
D39 YPKSIAYGFKIDPELENMKIPKFTLQPLVENYFAHGVDHRRTDNVISIKALKQDGFVEIL
D39V YPKSIAYGFKIDPELENMKIPKFTLQPLVENYFAHGVDHRRTDNVISIKALKQDGFVEIL
Hungary19A-6 YPKSIAYGFKIDPELENMKIPKFTLQPLVENYFAHGVDHRRTDNVISIKALKQDGFVEIL
EF3030 YPKSIAYGFKIDPELENMKIPKFTLQPLVENYFAHGVDHRRTDNVISIKALKQDGFVEIL
************************************************************
TIGR4 VVDNGRGMSAEKLANIREKLSQRYFEHQASYSDQRQSIGIVNVHERFVLYFGDRYAITIE
D39 VVDNGRGMSAEKLANIREKLSQKYFEHQASYSDQRQSIGIVNVHERFVLYFGDRYAITIE
D39V VVDNGRGMSAEKLANIREKLSQKYFEHQASYSDQRQSIGIVNVHERFVLYFGDRYAITIE
Hungary19A-6 VVDNGRGMSAEKLANIREKLSQKYFEHQASYSDQRQSIGIVNVHERFVLYFGDRYAITIE
EF3030 VVDNGRGMSAEKLANIREKLSQRNFEHQASYSDQRQSIGIVNVHERFVLYFGDRYAITIE
**********************: ************************************
TIGR4 SAEQAGVQYRITIQDE
D39 SAEQAGVQYRITIQDE
D39V SAEQAGVQYRITIQDE
Hungary19A-6 SAEQAGVQYRITIQDE
EF3030 SAEQAGVQYRITIQDE
****************