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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000871000
- symbol?: metQ
- synonym:
- description?: MetQ/NlpA family ABC transporter substrate-binding protein
- MetQ/NlpA family ABC transporter substrate-binding protein
- lipoprotein
- putative lipoprotein
- D-methionine-binding lipoprotein MetQ
- O-sialoglycoprotein endopeptidase
- ABC transporter substrate-binding lipoprotein
- Methionine ABC transporter substrate-binding protein
- ABC transporter, substrate binding protein (pseudogene)
- ABC transporter solute-binding protein - unknown substrate
- ABC transporter substrate binding protein
- ABC-type metal ion transport system, periplasmic component/surface antigen
- NLPA lipofamily protein
- NLPA lipoprotein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1023585..1024439
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKIKKWLGLAALATVAGLALAACGNSEKKADNATTIKIATVNRSGSEEKRWDKIQELVKK
D39 MKIKKWLGLAALATVAGLALAACGNSEKKADNATTIKIATVNRSGSEEKRWDKIQELVKK
D39V MKIKKWLGLAALATVAGLALAACGNSEKKADNATTIKIATVNRSGSEEKRWDKIQELVKK
Hungary19A-6 MKIKKWLGLVALATVAGLALAACGNSEKKADNATTIKIATVNRSGSEEKRWDKIQELVKK
EF3030 MKIKKWLGLAALATVAGLALAACGNSEKKADNATTIKIATVNRSGSEEKRWDKIQELVKK
*********.**************************************************
TIGR4 DGITLEFTEFTDYSQPNKATADGEVDLNAFQHYNFLNNWNKENGKDLVAIADTYISPIRL
D39 DGITLEFTEFTDYSQPNKATADGEVDLNAFQHYNFLNNWNKENGKDLVAIGDTYISPIRL
D39V DGITLEFTEFTDYSQPNKATADGEVDLNAFQHYNFLNNWNKENGKDLVAIGDTYISPIRL
Hungary19A-6 DGITLEFTEFTDYSQPNKATADGEVDLNAFQHYNFLNNWNKENGKDLVAIADTYISPIRL
EF3030 DGITLEFTEFTDYSQPNKATADGEVDLNAFQHYNFLNNWNKENGKDLVAIGDTYISPIRL
**************************************************.*********
TIGR4 YSGLNGSANKYTKVEDIPANGEIAVPNDATNESRALYLLQSAGLIKLDVSGTALATVANI
D39 YSGLNGSANKYTKVEDIPANGEIAVPNDATNESRALYLLQSAGLIKLDVSGTALATVANI
D39V YSGLNGSANKYTKVEDIPANGEIAVPNDATNESRALYLLQSAGLIKLDVSGTALATVANI
Hungary19A-6 YSGLNGSANKYTKVEDIPANGEIAVPNDATNESRALYLLQSAGLIKLDVSGTALATVANI
EF3030 YSGLNGSANKYTKVEDIPANGEIAVPNDATNESRALYLLQSAGLIKLDVSGTALATVANI
************************************************************
TIGR4 KENPKNLKITELDASQTARSLSSVDAAVVNNTFVTEAKLDYKKSLFKEQADENSKQWYNI
D39 KENPKNLKITELDASQTARSLSSVDAAVVNNTFVTEAKLDYKKALFKEQADENSKQWYNI
D39V KENPKNLKITELDASQTARSLSSVDAAVVNNTFVTEAKLDYKKALFKEQADENSKQWYNI
Hungary19A-6 KENPKNLKITELDASQTARSLSSVDAAVVNNTFVTEAKLDYKKALFKEQADENSKQWYNI
EF3030 KENPKNLKITELDASQTARSLSSVDAAVVNNTFVTEAKLDYKKALFKEQADENSKQWYNI
*******************************************:****************
TIGR4 IVAKKDWETSPKADAIKKVIAAYHTDDVKKVIEESSDGLDQPVW
D39 IVAKKDWETSPKADAIKKVIAAYHTDDVKKVIEESSDGLDQPVW
D39V IVAKKDWETSPKADAIKKVIAAYHTDDVKKVIEESSDGLDQPVW
Hungary19A-6 IVAKKDWETSPKADAIKKVIAAYHTDDVKKVIEESSDGLDQPVW
EF3030 IVAKKDWETSPKADAIKKVIAAYHTDDVKKVIEESSDGLDQPVW
********************************************