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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000884000
- symbol?: —
- synonym:
- description?: divalent metal cation transporter
- divalent metal cation transporter
- putative integral membrane protein
- mn2+ and fe2+ transporter of the nramp family
- conserved hypothetical protein
- membrane protein
- Mn2+ and Fe2+ transporters of the NRAMP family
- Nramp family metal ion transporter
- membrane protein, putative
- natural resistance-associated macrophage family protein
- NRAMP family Mn2+/Fe2+ transporter
- putative membrane protein
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1035700..1036962
- occurrence?: in 98% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSQAISLNQSTWASKLKAMGPGILMATAAVGGSHIVSSTQAGGSYGWSLLLLVILANVFK
D39 MSQAISLNQSTWASKLKAMGPGILMATAAVGGSHIVSSTQAGGSYGWSLLLLVILANVFK
D39V MSQAISLNQSTWASKLKAMGPGILMATAAVGGSHIVSSTQAGGSYGWSLLLLVILANVFK
Hungary19A-6 MSQAISLNQSTWASKLKAMGPGILMATAAVGGSHIVSSTQAGGSYGWSLLLLVILANVFK
EF3030 MSQAISLNQSTWASKLKAMGPGILMATAAVGGSHIVSSTQAGGSYGWSLLLLVILANVFK
************************************************************
TIGR4 YPFFRFGAEYTADTGKTLVEGYAEKGKLYLWIFFILNVFSAMVNTAGVAILCSAIIASAF
D39 YPFFRFGAEYTADTGKTLVEGYAEKGKPYLWIFFILNVFSAMVNTAGVAILCSAIIASAF
D39V YPFFRFGAEYTADTGKTLVEGYAEKGKPYLWIFFILNVFSAMVNTAGVAILCSAIIASAF
Hungary19A-6 YPFFRFGAEYTADTGKTLVEGYAEKGKLYLWIFFILNVFSAMVNTAGVAILCSAIIASAF
EF3030 YPFFRFGAEYTADTGKTLVEGYAEKGKLYLWIFFILNVFSAMVNTAGVAILCSAIIASAF
*************************** ********************************
TIGR4 PMIGLSITQWSLILVAIIWAMLLFGGYKLLDGMVKWIMSALTIATVLAVIIAAVKHPEYS
D39 PMIGLSITQWSLILVAIIWAMLLFGGYKLLDGMVKWIMSALTIATVLAVIIAAVKHPEYS
D39V PMIGLSITQWSLILVAIIWAMLLFGGYKLLDGMVKWIMSALTIATVLAVIIAAVKHPEYS
Hungary19A-6 PMIGLSITQWSLILVAIIWAMLLFGGYKLLDGMVKWIMSALTIATVLAVIIAAVKHPEYS
EF3030 PMIGLSITQWSLILVAIIWAMLLFGGYKLLDGMVKWIMSALTIATVLAVIIAAVKHPEYS
************************************************************
TIGR4 SDFVEKTPWQMAALPFIVSLLGWMPAPIEISAINSLWSAEKRKTVNFNTEDALFDFNTGY
D39 SDFVEKTPWQMAALPFIVSLLGWMPAPIEISAINSLWSAEKRKTVNFNTEDALFDFNTGY
D39V SDFVEKTPWQMAALPFIVSLLGWMPAPIEISAINSLWSAEKRKTVNFNTEDALFDFNTGY
Hungary19A-6 SDFVEKTPWQMAALPFIVSLLGWMPAPIEISAINSLWSAEKRKTVNFNTEDALFDFNTGY
EF3030 SDFVEKTPWQMAALPFIVSLLGWMPAPIEISAINSLWSAEKRKTVNFNTEDALFDFNTGY
************************************************************
TIGR4 IGTAILAVFFVALGALIQYPTGQAVEAASAKYISQFVGMYASVLGEWSRYLITFIAFLCI
D39 IGTAILAVFFVALGALIQYPTGQAVEAASAKYISQFVGMYASVLGEWSRYLITFIAFLCI
D39V IGTAILAVFFVALGALIQYPTGQAVEAASAKYISQFVGMYASVLGEWSRYLITFIAFLCI
Hungary19A-6 IGTAILAVFFVALGALIQYPTGQAVEAASAKYISQFVGMYASVLGEWSRYLITFIAFLCI
EF3030 IGTAILAVFFVALGALIQYPTGQAVEAASAKYISQFVGMYASVLGEWSRYLITFIAFLCI
************************************************************
TIGR4 FGTVITVIDGYSRVNQESLRLLISQKEDNRKSLNIWMTITAIIGIVIIKFFAGQVSTMLR
D39 FGTVITVIDGYSRVNQESLRLLISQKEDNRKSLNIWMTITAIIGIVIIKFFAGQVSTMLR
D39V FGTVITVIDGYSRVNQESLRLLISQKEDNRKSLNIWMTITAIIGIVIIKFFAGQVSTMLR
Hungary19A-6 FGTVITVIDGYSRVNQESLRLLISQKEDNRKSLNIWMTITAIIGIVIIKFFAGQVSTMLR
EF3030 FGTVITVIDGYSRVNQESLRLLISQKEDNRKSLNIWMTITAIIGIVIIKFFAGQVSTMLR
************************************************************
TIGR4 FAMIGSFLTTPFFALLNYALVTRENKNLPSWLKHLAIAGLIFLFGFAIFFIYALAIGKAG
D39 FAMIGSFLTTPFFALLNYALVTRENKNLPSWLKHLAIAGLIFLFGFAIFFIYALAIGKAG
D39V FAMIGSFLTTPFFALLNYALVTRENKNLPSWLKHLAIAGLIFLFGFAIFFIYALAIGKAG
Hungary19A-6 FAMIGSFLTTPFFALLNYALVTRENKNLPSWLKHLAIAGLIFLFGFAIFFIYALAIGKAG
EF3030 FAMIGSFLTTPFFALLNYALVTRENKNLPSWLKHLAIAGLIFLFGFAIFFIYALAIGKAG
************************************************************