PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN000900000
• symbol^?: ribE
• synonym:
• description^?: Riboflavin synthase

  descriptions from strain specific annotations:

  • Riboflavin synthase
  • riboflavin synthase, alpha subunit
  • Riboflavin synthase alpha-chain
  • riboflavin synthase subunit alpha
  • riboflavin synthase alpha subunit
  • Riboflavin synthase eubacterial/eukaryotic
  • Riboflavin synthase RibE
• strand^?: -
• coordinates^?: 1060410..1061045
• occurrence^?: in 98% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS00880 (ribE)
(2)
D39:
SPD_RS00935 (ribE)
(2)
D39V:
SPV_RS00935 (ribE)
(19A)
Hungary19A-6:
SPH_RS01350 (ribE)
(19F)
EF3030:
EF3030_RS00915 (ribE)
(6B)^?
670-6B:
SP670_RS01275 (ribE)
(6A)
6A-10:
HKM25_RS00955 (ribE)
(5)
70585:
SP70585_RS01180 (ribE)
(19F)
A026:
T308_RS00815 (ribE)
(3)
A66:
A66_RS00920 (ribE)
(11A)
AP200:
SPAP_RS01130 (ribE)
(12F)
ASP0581:
EL334_RS01000 (ribE)
(19F)
ATCC 49619:
EL263_RS01125 (ribE)
(23F)
ATCC 700669:
SPN23F_RS00920 (ribE)
(19F)
BM6001:
ODS73_RS01260 (ribE)
(1)
BVJ1JL:
JN057_RS01110 (ribE)
(14)
CGSP14:
SPCG_RS01030 (ribE)
(19F)
G54:
SPG_RS00875 (ribE)
(1)
gamPNI0373:
HMPREF1038_RS01170 (ribE)
(3)
HU-OH:
EL271_RS00920 (ribE)
(19A)
Hu15:
SPNHU15_RS01140 (ribE)
(19A)
Hu17:
SPNHU17_RS01070 (ribE)
(1)
INV104:
INV104_RS00900 (ribE)
(14)
INV200:
SPNINV200_RS00910 (ribE)
(14)
JJA:
SPJ_RS00975 (ribE)
(19F)
MDRSPN001:
—
(1)
NCTC7465:
AT689_RS01525 (ribE)
(2)
NCTC7466:
DQM66_RS00935 (ribE)
(4)
NU83127:
EL277_RS00975 (ribE)
(3)
OXC141:
SPNOXC_RS01160 (ribE)
(1)
P1031:
SPP_RS01165 (ribE)
(2)
R6:
SPR_RS00880 (ribE)
(19A)
SP49:
BMJ42_RS01495 (ribE)
(1)
SPN032672:
SPN032672_RS07185 (ribE)
(3)
SPN034156:
SPN034156_RS07080 (ribE)
(3)
SPN034183:
SPN034183_RS01165 (ribE)
(3)
SPN994038:
SPN994038_RS01095 (ribE)
(3)
SPN994039:
SPN994039_RS01090 (ribE)
(3)
SPNA45:
SPNA45_RS10295 (ribE)
(19F)
ST556:
MYY_RS01295 (ribE)
(19F)
Taiwan19F-14:
SPT_RS01085 (ribE)
(19A)
TCH8431/19A:
HMPREF0837_RS02350 (ribE)
(4)
Xen35:
CXP32_RS00915 (ribE)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MFTGIIEEIGKVERIQKDSRNCKLSIKASKILTDIHLGDSIAVNGICLTVTHFNHQSFTV
  D39             MFTGIIEEIGKVERIQKDSRNCKLSIKASKILTDIHLGDSIAVNGICLTVTHFNHQSFTV
  D39V            MFTGIIEEIGKVERIQKDSRNCKLSIKASKILTDIHLGDSIAVNGICLTVTHFNHQSFTV
  Hungary19A-6    MFTGIIEEIGKVERIQKDSRNCKLSIKASKILTDIHLGDSIAVNGICLTVTHFNHQSFTV
  EF3030          MFTGIIEEIGKVERIQKDSRNCKLSIKASKILTDIHLGNSIAVNGICLTVTHFNHQSFTV
                  **************************************:*********************
  
  TIGR4           DVMNETWSRTALTLLKHGSEVNLERALSVNGRLGGHVVTGHIDGTGKISSIKKDDNAVWY
  D39             DVMNETWSRTALTLLKHGSEVNLERALSVNGRLGGHVVTGHIDGTGKISSIKKDDNAVWY
  D39V            DVMNETWSRTALTLLKHGSEVNLERALSVNGRLGGHVVTGHIDGTGKISSIKKDDNAVWY
  Hungary19A-6    DVMNETWSRTALTLLKHGSEVNLERALSVNGRLGGHVVTGHIDGTGKISSIKKDDNAVWY
  EF3030          DVMNETWSRTALTLLKHGSEVNLERALSVNGRLGGHVVTGHIDGTGKISSIKKDDNAVWY
                  ************************************************************
  
  TIGR4           QINTQKEILDLIVEKGSITIDGISLTVAKVSKVNFSVSVIPHTLEQTILKSKQVGSTVNL
  D39             QINTQKEILDLIVEKGSITIDGISLTVAKVSKVNFSVSVIPHTLEQTILKSKQVGSTVNL
  D39V            QINTQKEILDLIVEKGSITIDGISLTVAKVSKVNFSVSVIPHTLEQTILKSKQVGSTVNL
  Hungary19A-6    QINTQKEILDLIVEKGSITIDGISLTVAKVSKVNFSVSVIPHTLEQTILKSQQVGNTVNL
  EF3030          QINTQKEILDLIVEKGSITIDGISLTVAKVSKVNFSVSVIPHTLEQTILKSKQVGSTVNL
                  ***************************************************:***.****
  
  TIGR4           ENDILGKYVQKLMDNSPKSEISKELLYQNGF
  D39             ENDILGKYVQKLMDNSPKSEISKELLYQNGF
  D39V            ENDILGKYVQKLMDNSPKSEISKELLYQNGF
  Hungary19A-6    ENDILGKYVQKLMDNSPKLEISKELLYQNGF
  EF3030          ENDILGKYVQKLMDNSPKSEISKELLYQNGF
                  ****************** ************