PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001089000
• symbol^?: rsmH
• synonym: mraW
• description^?: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH

  descriptions from strain specific annotations:

  • 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
  • S-adenosyl-methyltransferase MraW
  • ribosomal RNA small subunit methyltransferase H
  • 16S rRNA methyltransferase
  • yllC protein
  • 16S rRNA (cytosine(1402)-N(4))-methyltransferase MraW
  • Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
  • rRNA small subunit methyltransferase H
• strand^?: +
• coordinates^?: 1288817..1289767
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS01630 (rsmH)
(2)
D39:
SPD_RS01665 (rsmH)
(2)
D39V:
SPV_RS01665 (rsmH)
(19A)
Hungary19A-6:
SPH_RS02155 (rsmH)
(19F)
EF3030:
EF3030_RS01615 (rsmH)
(6B)^?
670-6B:
SP670_RS02030 (rsmH)
(6A)
6A-10:
HKM25_RS01750 (rsmH)
(5)
70585:
SP70585_RS01955 (rsmH)
(19F)
A026:
T308_RS01675 (rsmH)
(3)
A66:
A66_RS01650 (rsmH)
(11A)
AP200:
SPAP_RS01805 (rsmH)
(12F)
ASP0581:
EL334_RS01815 (rsmH)
(19F)
ATCC 49619:
EL263_RS01855 (rsmH)
(23F)
ATCC 700669:
SPN23F_RS01590 (rsmH)
(19F)
BM6001:
ODS73_RS02120 (rsmH)
(1)
BVJ1JL:
JN057_RS01820 (rsmH)
(14)
CGSP14:
SPCG_RS01750 (rsmH)
(19F)
G54:
SPG_RS01545 (rsmH)
(1)
gamPNI0373:
HMPREF1038_RS01885 (rsmH)
(3)
HU-OH:
EL271_RS01655 (rsmH)
(19A)
Hu15:
SPNHU15_RS01925 (rsmH)
(19A)
Hu17:
SPNHU17_RS01855 (rsmH)
(1)
INV104:
INV104_RS01620 (rsmH)
(14)
INV200:
SPNINV200_RS01595 (rsmH)
(14)
JJA:
SPJ_RS01645 (rsmH)
(19F)
MDRSPN001:
MDRSPN_RS01635 (rsmH)
(1)
NCTC7465:
AT689_RS00820 (rsmH)
(2)
NCTC7466:
DQM66_RS01665 (rsmH)
(4)
NU83127:
EL277_RS01730 (rsmH)
(3)
OXC141:
SPNOXC_RS01870 (rsmH)
(1)
P1031:
SPP_RS01835 (rsmH)
(2)
R6:
SPR_RS01580 (rsmH)
(19A)
SP49:
BMJ42_RS02345 (rsmH)
(1)
SPN032672:
SPN032672_RS07905 (rsmH)
(3)
SPN034156:
SPN034156_RS07795 (rsmH)
(3)
SPN034183:
SPN034183_RS01880 (rsmH)
(3)
SPN994038:
SPN994038_RS01805 (rsmH)
(3)
SPN994039:
SPN994039_RS01800 (rsmH)
(3)
SPNA45:
SPNA45_RS09535 (rsmH)
(19F)
ST556:
MYY_RS02140 (rsmH)
(19F)
Taiwan19F-14:
SPT_RS01935 (rsmH)
(19A)
TCH8431/19A:
HMPREF0837_RS03105 (rsmH)
(4)
Xen35:
CXP32_RS01680 (rsmH)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MTKEFHHVTVLLHETIDMLDVKPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNA
  D39             MTKEFHHVTVLLHETIDMLDVKPEGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNA
  D39V            MTKEFHHVTVLLHETIDMLDVKPEGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNA
  Hungary19A-6    MTKEFHHVTVLLHETIDMLDVKPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNA
  EF3030          MTKEFHHVTVLLHETIDMLDVKPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNA
                  ***********************:************************************
  
  TIGR4           IDNAQKRLAPYIEKGMVTFIKDNFRHLQACLREAGVQEIDGICYDLGVSSPQLDQRERGF
  D39             IDNAQKRLAPYIEKGMVTFIKDNFRHLQARLREAGVQEIDGICYDLGVSSPQLDQRERGF
  D39V            IDNAQKRLAPYIEKGMVTFIKDNFRHLQARLREAGVQEIDGICYDLGVSSPQLDQRERGF
  Hungary19A-6    IDNAQKRLAPYIEKGMVTFIKDNFRHLQARLREAGVQEIDGICYDLGVSSPQLDQRERGF
  EF3030          IDNAQKRLAPYIEKGMVTFIKDNFRHLQARLREAGVQEIDGICYDLGVSSPQLDQRERGF
                  ***************************** ******************************
  
  TIGR4           SYKKDAPLDMRMNQDASLTAYEVVNNYDYHDLVRIFFKYGEDKFSKQIARKIEQAREVKP
  D39             SYKKDAPLDMRMNQDASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARKIEQAREVKP
  D39V            SYKKDAPLDMRMNQDASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARKIEQAREVKP
  Hungary19A-6    SYKKDAPLDMRMNQDASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARKIEQEREVKP
  EF3030          SYKKDAPLDMRMNQDASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARKIEQAREVKP
                  *************************:**************************** *****
  
  TIGR4           IETTTELAEIIKLVKPAKELKKKGHPAKQIFQAIRIEVNDELGAADESIQQAMDMLALDG
  D39             IETTTELAEIIKLVKPAKELKKKGHPAKQIFQAIRIEVNDELGAADESIQQAMDMLALDG
  D39V            IETTTELAEIIKLVKPAKELKKKGHPAKQIFQAIRIEVNDELGAADESIQQAMDMLALDG
  Hungary19A-6    IETTTELAEIIKSAKPAKELKKKGHPAKQIFQSIRIEVNDELGAADESIQQAMDMLALDG
  EF3030          IETTTELAEIIKLVKPAKELKKKGHPAKQIFQAIRIEVNDELGAADESIQQAMDMLALDG
                  ************ .******************:***************************
  
  TIGR4           RISVITFHSLEDRLTKQLFKEASTVEVPKGLPFIPDDLKPKMELVSRKPILPSAEELEAN
  D39             RISVITFHSLEDRLTKQLFKEASTVEVPKGLPFIPDDLKPKMELVSRKPILPSAEELEAN
  D39V            RISVITFHSLEDRLTKQLFKEASTVEVPKGLPFIPDDLKPKMELVSRKPILPSAEELEAN
  Hungary19A-6    RISVITFHSLEDRLTKQLFKEASTVEVPKGLPFIPDDLKPKMELVSRKPILPSAEELEAN
  EF3030          RISVITFHSLEDRLTKQLFKEASTVEVPKGLPFIPDDLKPKMELVSRKPILPSAEELEAN
                  ************************************************************
  
  TIGR4           NRSHSAKLRVVRKIHK
  D39             NRSHSAKLRVVRKIHK
  D39V            NRSHSAKLRVVRKIHK
  Hungary19A-6    NRSHSAKLRVARKIHK
  EF3030          NRSHSAKLRVVRKIHK
                  **********.*****