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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001208000
- symbol?: rlmL
- synonym:
- description?: THUMP domain-containing class I SAM-dependent RNA methyltransferase
- THUMP domain-containing class I SAM-dependent RNA methyltransferase
- putative RNA methylase family protein
- methyltransferase
- class I SAM-dependent RNA methyltransferase
- conserved hypothetical protein
- N-6 adenine-specific DNA methylase
- Ribosomal RNA large subunit methyltransferase
- RNA methyltransferase
- Predicted N6-adenine-specific DNA methylase
- 23S rRNA (guanine(2445)-N(2))-methyltransferase
- N-6 DNA methylase
- putative site-specific DNA-methyltransferase (adenine-specific)
- Ribosomal RNA large subunit methyltransferase K/L
- RNA methylase family protein UPF0020, putative
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1508243..1509434
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKKEFNLIATVAAGLEAVVGREVRELGYDCQVENGRVRFQGDVRAIIETNLWLRAADRIK
D39 MKKEFNLIATVAAGLEAVVGREVRELGYDCQVENGRVRFQGDVRAIIETNLWLRAADRIK
D39V MKKEFNLIATVAAGLEAVVGREVRELGYDCQVENGRVRFQGDVRAIIETNLWLRAADRIK
Hungary19A-6 MKKEFNLIATAAAGLEAVVGREVRELGYDCQVENGRVRFQGDVRAIIETNLWLRAADRIK
EF3030 MKKEFNLIATVAAGLEAVVGREVRELGYDCQVENGRVRFQGDVRVIIETNLWLRAADRIK
**********.*********************************.***************
TIGR4 IIVGTFPAKTFEELFQGVFALDWENYLPLGARFPISKAKCVKSKLHNEPSVQAISKKAVV
D39 IIVGTFPAKTFEELFQGVFALDWENYLPLGARFPISKAKCVKSKLHNEPSVQAISKKAVV
D39V IIVGTFPAKTFEELFQGVFALDWENYLPLGARFPISKAKCVKSKLHNEPSVQAISKKAVV
Hungary19A-6 IIVGTFPAKTFEELFQGVFALDWENYLPLGARFPISKAKCVKSKLHNEPSVQAISKKAVV
EF3030 IIVGTFPAKTFEELFQGVFALDWENYLPLGARFPISKAKCVKSKLHNEPSVQAISKKAVV
************************************************************
TIGR4 KKLQKHYARPEGVPLMENGPEFKIEVSILKDVATVMIDTTGSSLFKRGYRTEKGGAPIKE
D39 KKLQKHYARPEGVPLMENGPEFKIEVSILKDVATVMIDTTGSSLFKRGYRTEKGGAPIKE
D39V KKLQKHYARPEGVPLMENGPEFKIEVSILKDVATVMIDTTGSSLFKRGYRTEKGGAPIKE
Hungary19A-6 KKLQKHYARPEGVPLMENGPEFKIEVSILKDVATVMIDTTGSSLFKRGYRTEKGGAPIKE
EF3030 KKLQKHYARPEGVPLMENGPEFKIEVSILKDVATVMIDTTGSSLFKRGYRTEKGGAPIKE
************************************************************
TIGR4 NMAAAILQLSNWYPDKPLIDPTCGSGTFCIEAVMIARKMAPGLRRSFAFEEWNWISDRLI
D39 NMAAAILQLSNWYPDKPLIDPTCGSGTFCIEAVMIARKMAPGLRRSFAFEEWNWISDRLI
D39V NMAAAILQLSNWYPDKPLIDPTCGSGTFCIEAVMIARKMAPGLRRSFAFEEWNWISDRLI
Hungary19A-6 NMAAAILQLSNWYPDKPLIDPTCGSGTFCIEAVMIARKMAPGLRRSFAFEEWNWVSDRLI
EF3030 NMAAAILQLSNWYPDKPLIDPTCGSGTFCIESVMIARKMAPGLRRSFAFEEWNWISDRLI
*******************************:**********************:*****
TIGR4 QEVRTEAAKKVDRELELDIMGCDIDARMVEIAKANAQVAGVAGDITFKQMRVQDLRSDKI
D39 QEVRTEAAKKVERELELDIMGCDIDARMVEIAKANAQAAGVAGDITFKQMRVQDLRSDKI
D39V QEVRTEAAKKVERELELDIMGCDIDARMVEIAKANAQAAGVAGDITFKQMRVQDLRSDKI
Hungary19A-6 QEVRTEAAKKVDRELELDIMGCDIDARMVEIAKANAQAAGVAGDITFKQMRVQDLRSDKI
EF3030 QEVRTEAAKKVERELELDIMGCDIDARMVEIAKANAQAAGVAGDITFKQMRVQDLRSDKI
***********:*************************.**********************
TIGR4 NGVIISNPPYGERLSDDAGVTKLYAEMGQVFAPLKTWSKFILTSDEAFESKYGSQADKKR
D39 NGVIISNPPYGERLSDDAGVTKLYAEMGQVFAPLKTWSKFILTSDEAFESKYGSQADKKR
D39V NGVIISNPPYGERLSDDAGVTKLYAEMGQVFAPLKTWSKFILTSDEAFESKYGSQADKKR
Hungary19A-6 NGVIISNPPYGERLSDDAGVTKLYAEMGQVFAPLKTWSKFILTSDEAFESKYGSQADKKR
EF3030 NGVIISNPPYGERLSDDAGVTKLYAEMGQVFAPLKTWSKFILTSDEAFESKYGSQADKKR
************************************************************
TIGR4 KLYNGTLKVDLYQYFGQRVKRQEVK
D39 KLYNGTLKVDLYQYFGQRVKRQEVK
D39V KLYNGTLKVDLYQYFGQRVKRQEVK
Hungary19A-6 KLYNGTLKVDLYQYFGQRVKRQEVK
EF3030 KLYNGTLKVDLYQYFGQRVKRQEVK
*************************