PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001282000
• symbol^?: gatA
• synonym:
• description^?: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA

  descriptions from strain specific annotations:

  • Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
  • glutamyl-tRNA amidotransferase subunit A
  • glutamyl-tRNA(Gln) amidotransferase subunit A
  • glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A)
  • glutamyl-tRNA(Gln) amidotransferase, A subunit
  • aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
  • aspartyl/glutamyl-tRNA amidotransferase subunit A
  • Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)
  • Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln) amidotransferase subunit A
  • Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A
  • Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
  • Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-like amidase
  • Bifunctional aspartyl-tRNA(Asp) amidotransferase subunit A/glutamyl-tRNA(Glu) amidotransferase subunit A
  • glutamyl-tRNA(Gln) amidotransferase%2C A subunit
  • glutamyl-tRNA amidotransferase
  • Glu-tRNAGln amidotransferase subunit A
• strand^?: -
• coordinates^?: 1606518..1607984
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS02155 (gatA)
(2)
D39:
SPD_RS02150 (gatA)
(2)
D39V:
SPV_RS02150 (gatA)
(19A)
Hungary19A-6:
SPH_RS02645 (gatA)
(19F)
EF3030:
EF3030_RS02130 (gatA)
(6B)^?
670-6B:
SP670_RS02565 (gatA)
(6A)
6A-10:
HKM25_RS02200 (gatA)
(5)
70585:
SP70585_RS02495 (gatA)
(19F)
A026:
T308_RS02115 (gatA)
(3)
A66:
A66_RS02090 (gatA)
(11A)
AP200:
SPAP_RS02225 (gatA)
(12F)
ASP0581:
EL334_RS02330 (gatA)
(19F)
ATCC 49619:
EL263_RS02330 (gatA)
(23F)
ATCC 700669:
SPN23F_RS02095 (gatA)
(19F)
BM6001:
ODS73_RS02575 (gatA)
(1)
BVJ1JL:
JN057_RS02295 (gatA)
(14)
CGSP14:
SPCG_RS02250 (gatA)
(19F)
G54:
SPG_RS02025 (gatA)
(1)
gamPNI0373:
HMPREF1038_RS02365 (gatA)
(3)
HU-OH:
EL271_RS02075 (gatA)
(19A)
Hu15:
SPNHU15_RS02395 (gatA)
(19A)
Hu17:
SPNHU17_RS02325 (gatA)
(1)
INV104:
INV104_RS02185 (gatA)
(14)
INV200:
SPNINV200_RS02105 (gatA)
(14)
JJA:
SPJ_RS02130 (gatA)
(19F)
MDRSPN001:
MDRSPN_RS02100 (gatA)
(1)
NCTC7465:
AT689_RS00340 (gatA)
(2)
NCTC7466:
DQM66_RS02150 (gatA)
(4)
NU83127:
EL277_RS02245 (gatA)
(3)
OXC141:
SPNOXC_RS02285 (gatA)
(1)
P1031:
SPP_RS02320 (gatA)
(2)
R6:
SPR_RS02020 (gatA)
(19A)
SP49:
BMJ42_RS02795 (gatA)
(1)
SPN032672:
SPN032672_RS08440 (gatA)
(3)
SPN034156:
SPN034156_RS08200 (gatA)
(3)
SPN034183:
SPN034183_RS02295 (gatA)
(3)
SPN994038:
SPN994038_RS02220 (gatA)
(3)
SPN994039:
SPN994039_RS02215 (gatA)
(3)
SPNA45:
SPNA45_RS09065 (gatA)
(19F)
ST556:
MYY_RS02585 (gatA)
(19F)
Taiwan19F-14:
SPT_RS02375 (gatA)
(19A)
TCH8431/19A:
HMPREF0837_RS03545 (gatA)
(4)
Xen35:
CXP32_RS02205 (gatA)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MTFNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDE
  D39             MTFNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDE
  D39V            MTFNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDE
  Hungary19A-6    MTFNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDE
  EF3030          MTFNNKTIEELHNLLVSKEISATELTQATLEDIKSREEALNSFVTIAEEQALVQAKAIDE
                  *******************************:****************************
  
  TIGR4           AGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKT
  D39             AGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKT
  D39V            AGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKT
  Hungary19A-6    AGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKT
  EF3030          AGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKT
                  ************************************************************
  
  TIGR4           NMDEFAMGGSGETSHYGATKNAWNHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQP
  D39             NMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQP
  D39V            NMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQP
  Hungary19A-6    NMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQP
  EF3030          NMDEFAMGGSGETSHYGATKNAWDHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQP
                  ***********************:************************************
  
  TIGR4           AAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDSTSAP
  D39             AAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDSTSAP
  D39V            AAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDSTSAP
  Hungary19A-6    AAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDSTSAP
  EF3030          AAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDSTSAP
                  ************************************************************
  
  TIGR4           VRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVSLPHS
  D39             VRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVSLPHS
  D39V            VRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVSLPHS
  Hungary19A-6    VRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVSLPHS
  EF3030          VRIADFTSKIGQDIKGMKIALPKEYLGEGINPEVKETILNAAKHFEKLGAIVEEVSLPHS
                  ******************************:*****************************
  
  TIGR4           KYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRRIMLG
  D39             KYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRRIMLG
  D39V            KYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRRIMLG
  Hungary19A-6    KYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRRIMLG
  EF3030          KYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRRIMLG
                  ************************************************************
  
  TIGR4           TFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFADYDLILGPTAPSVAYDLDSLNHDPVAMY
  D39             TFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFADYDLILGPTAPSVAYDLDSLNHDPVAMY
  D39V            TFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFADYDLILGPTAPSVAYDLDSLNHDPVAMY
  Hungary19A-6    TFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFADYDLILGPTAPSVAYDLNSLNHDPVAMY
  EF3030          TFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFADYDLILGPTAPSVAYDLDSLNHDPVAMY
                  *************************************************:**********
  
  TIGR4           LADLLTIPVNLAGLPGISIPAGFSQGLPVGLQLIGPKYSEETIYQAAAAFEATTDYHKQQ
  D39             LADLLTIPVNLAGLPGISIPAGFSQGLPVGLQLIGPKHSEETIYQVAAAFEATTGYHKQQ
  D39V            LADLLTIPVNLAGLPGISIPAGFSQGLPVGLQLIGPKHSEETIYQVAAAFEATTGYHKQQ
  Hungary19A-6    LADLLTIPVNLAGLPGISIPAGFSQGLPVGLQLIGPKYSEETIYQAAAAFEATTDYHKQQ
  EF3030          LADLLTIPVNLAGLPGISIPAGFSQGLPVGLQLIGPKYSEETIYQAAAAFEATTDYHKQQ
                  *************************************:*******.********.*****
  
  TIGR4           PVIFGGDN
  D39             PVIFGGDN
  D39V            PVIFGGDN
  Hungary19A-6    PVIFGGDN
  EF3030          PVIFGGDN
                  ********