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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001300000
- symbol?: glnHP1
- synonym:
- description?: ABC transporter substrate-binding protein/permease
- ABC transporter substrate-binding protein/permease
- amino acid ABC transporter, amino acid-binding protein/permease protein
- glutamine ABC transporter, glutamine-binding protein/permease protein
- glutamine ABC transporter substrate-binding protein
- L-cystine transport system permease protein
- ABC transporter, permease protein
- ABC transporter-amino acid transport%3B amino acid-binding protein/permease protein
- ABC transporter-amino acid transport, amino acid-binding protein/permease protein
- ABC transporter-amino acid transport; amino acid-binding protein/permease protein
- ABC transporter substrate binding protein - glutamine transport
- ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein
- amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein
- amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein
- Amino acid ABC transporter, glutamine-binding protein/permease protein
- glutamine ABC transporter, glutamine-binding protein/permease protein (pseudogene)
- Glutamine ABC transporter permease GlnHP1
- Glutamine transport system permease protein
- transporter substrate-binding domain-containing protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1624528..1626093
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MRKIYLSIFTSLLLMLGLVNVAQADEYLRIGMEAAYAPFNWTQDDDSNGAVKIDGTNQYA
D39 MRKIYLSIFTSLLLMLGLVNVAQADEYLRIGMEAAYAPFNWTQDDDSNGAVKIDGTNQYA
D39V MRKIYLSIFTSLLLMLGLVNVAQADEYLRIGMEAAYAPFNWTQDDDSNGAVKIDGTNQYA
Hungary19A-6 MRKIYLSIFTSLLLMLGLVNVAQADEYLRIGMEAAYAPFNWTQDDDSNGAVKIDGTNQYA
EF3030 MRKIYLSIFTSLLLMLGLVNVAQADEYLRIGMEAAYAPFNWTQDDDSNGAVKIDGTNQYA
************************************************************
TIGR4 NGYDVQIAKKIAKDLGKEPLVVKTKWEGLVPALTSGKIDMIIAGMSPTAERKQEIAFSSS
D39 NGYDVQIAKKIAKDLGKEPLVVKTKWEGLVPALTSGKIDMIIAGMSPTAERKQEIAFSSS
D39V NGYDVQIAKKIAKDLGKEPLVVKTKWEGLVPALTSGKIDMIIAGMSPTAERKQEIAFSSS
Hungary19A-6 NGYDVQIAKKIAKDLGKEPLVVKTKWEGLVPALTSGKIDMIIAGMSPTAERKQEIAFSSS
EF3030 NGYDVQIAKKIAKDLGKEPLVVKTKWEGLVPALTSGKIDMIIAGMSPTAERKQEIAFSSS
************************************************************
TIGR4 YYTSEPVLLVKKDSAYASAKSLDDFNGAKITSQQGVYLYNLIAQIPGAKKETAMGDFAQM
D39 YYTSEPVLLVKKDSAYASAKSLDDFNGAKITSQQGVYLYNLIAQIPGAKKETAMGDFAQM
D39V YYTSEPVLLVKKDSAYASAKSLDDFNGAKITSQQGVYLYNLIAQIPGAKKETAMGDFAQM
Hungary19A-6 YYTSEPVLLVKKDSAYASAKSLDDFNGAKITSQQGVYLYDLIAQIPGAKKETAMGDFAQM
EF3030 YYTSEPVLLVKKDSAYASAKSLDDFNGAKITSQQGVYLYDLIAQIPGAKKETAMGDFAQM
***************************************:********************
TIGR4 RQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTAIAIGLRKNDNRISQ
D39 RQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTAIAIGLRKNDNRISQ
D39V RQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTAIAIGLRKNDNRISQ
Hungary19A-6 RQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTAIAIGLRKNDNRISQ
EF3030 RQALEAGVIDAYVSERPEALTAEAANSKFKMIQVEPGFKTGEEDTAIAIGLRKNDNRISQ
************************************************************
TIGR4 INASIETISKDDQVALMDRMIKEQPAEATTTEETSSSFFSQVAKILSENWQQLLRGAGIT
D39 INASIETISKDDQVALMDRMIKEQPAEATTTEETSSSFFSQVAKILSENWQQLLRGAGIT
D39V INASIETISKDDQVALMDRMIKEQPAEATTTEETSSSFFSQVAKILSENWQQLLRGAGIT
Hungary19A-6 INASIETISKDDQVALMDRMIKEQPAEATTTEETSSSFFSQVAKILSENWQQLLRGAGIT
EF3030 INASIETISKDDQVALMDRMIKEQPAEATTTEETSSSFFSQVAKILSENWQQLLRGAGIT
************************************************************
TIGR4 LLISIVGTIIGLIIGLAIGVFRTAPLSENKVIYGLQKLVGWVLNVYIEIFRGTPMIVQSM
D39 LLISIVGTIIGLIIGLAIGVFRTAPLSENKVIYGLQKLVGWVLNVYIEIFRGTPMIVQSM
D39V LLISIVGTIIGLIIGLAIGVFRTAPLSENKVIYGLQKLVGWVLNVYIEIFRGTPMIVQSM
Hungary19A-6 LLISIVGTIIGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWVLNVYIEIFRGTPMIVQSM
EF3030 LLISIVGTIIGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWVLNVYIEIFRGTPMIVQSM
******************************.*****************************
TIGR4 VIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQ
D39 VIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQ
D39V VIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQ
Hungary19A-6 VIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQ
EF3030 VIYYGTAQAFGINLDRTLAAIFIVSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQ
************************************************************
TIGR4 TMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTI
D39 TMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTI
D39V TMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTI
Hungary19A-6 TMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTI
EF3030 TMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTI
************************************************************
TIGR4 IAVIYFVLTFTVTRILRFIERRMDMDTYTTGANQMQTEDLK
D39 IAVIYFVLTFTVTRILRFIERRMDMDTYTTGANQMQTEDLK
D39V IAVIYFVLTFTVTRILRFIERRMDMDTYTTGANQMQTEDLK
Hungary19A-6 IAVIYFVLTFTVTRILRFIERRMDMDTYTTGANQMQTEDLK
EF3030 IAVIYFVLTFTVTRILRFIERRMDMDTYTTGANQMQTEDLK
*****************************************