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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001337000
- symbol?: trkA
- synonym:
- description?: Trk system potassium transporter TrkA
- Trk system potassium transporter TrkA
- potassium uptake protein, Trk family
- putative cation transport protein
- Trk system potassium uptake protein TrkA
- potassium uptake protein
- potassium transporter TrkA
- Trk system potassium transport protein TrkA
- K+ transport systems, NAD-binding component
- potassium transporter peripheral membrane component
- potassium uptake protein, Trk family protein
- trkA-N domain protein
- Trk family potassium uptake protein TrkA
- Trk transporter
- Trk transporter NAD+ binding protein - K+ transport
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1685302..1686651
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
(12F)
ASP0581:
EL334_RS02505 (trkA)
(19F)
ATCC 49619:
EL263_RS02495 (trkA)
(23F)
ATCC 700669:
SPN23F_RS02245 (trkA)
(14)
INV200:
SPNINV200_RS02270 (trkA)
(14)
JJA:
SPJ_RS02280 (trkA)
(19F)
MDRSPN001:
MDRSPN_RS02225 (trkA)
(19A)
SP49:
BMJ42_RS02950 (trkA)
(1)
SPN032672:
SPN032672_RS08610 (trkA)
(3)
SPN034156:
SPN034156_RS08375 (trkA)
(3)
SPN034183:
SPN034183_RS02445 (trkA)
(3)
SPN994038:
SPN994038_RS02370 (trkA)
(3)
SPN994039:
SPN994039_RS02365 (trkA)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKIILVGGGKVGFALCRSLVAEKHDVLLIEQDEAVLNHIVSRFDIIGILGNGADFAILEQ
D39 MKIILVGGGKVGFALCRSLVAEKHDVLLIEQDEAVLNHIVSRFDIIGILGNGADFAILEQ
D39V MKIILVGGGKVGFALCRSLVAEKHDVLLIEQDEAVLNHIVSRFDIIGILGNGADFAILEQ
Hungary19A-6 MKIILVGGGKVGFALCRSLVAEKHDVLLIEQDEAVLNHIVSRFDIIGILGNGADFAILEQ
EF3030 MKIILVGGGKVGFALCRSLVAEKHDVLLIEQDEAVLNHIVSRFDIIGILGNGADFAILEQ
************************************************************
TIGR4 ASVQDCDIFIALTEHDEVNMIAAVLAKKMGAKETIVRVRNPEYSNSYFKEKNILGFSLIV
D39 ASVQDCDIFIALTEHDEVNMIAAVLAKKMGAKETIVRVRNPEYSNSYFKEKNILGFSLIV
D39V ASVQDCDIFIALTEHDEVNMIAAVLAKKMGAKETIVRVRNPEYSNSYFKEKNILGFSLIV
Hungary19A-6 ASVQDCDIFIALTEHDEVNMIAAVLAKKMGAKETIVRVRNPEYSNSYFKEKNILGFSLIV
EF3030 ASVQDCDIFIALTEHDEVNMIAAVLAKKMGAKETIVRVRNPEYSNSYFKEKNILGFSLIV
************************************************************
TIGR4 NPELLAARAIANIIDFPNALSVERFAGGRVSLMEFVVKSTSGLCQMPISDFRKKFGNVIV
D39 NPELLAARAIANIIDFPNALSVERFAGGRVSLMEFVVKSTSGLCQMPISDFRKKFGNVIV
D39V NPELLAARAIANIIDFPNALSVERFAGGRVSLMEFVVKSTSGLCQMPISDFRKKFGNVIV
Hungary19A-6 NPELLAARAIANIIDFPNALSVERFAGGRVSLMEFVVKSTSGLCQMPISDFRKKFGNVIV
EF3030 NPELLAARAIANIIDFPNALSVERFAGGRVSLMEFVVKSTSGLCQMPISDFRKKFGNVIV
************************************************************
TIGR4 CAIERDHQIIIPSGDMTVQDKDRIFVTGNRVDMILFHNYFKSRAVKSLLIVGAGRIAYYL
D39 CAIERDHQIIIPSGDMTVRDKDRIFVTGNRVDMILFHNYFKSRAVKSLLIVGAGRIAYYL
D39V CAIERDHQIIIPSGDMTVRDKDRIFVTGNRVDMILFHNYFKSRAVKSLLIVGAGRIAYYL
Hungary19A-6 CAIERDHQIIIPSGDMTVQDKDRIFVTGNRVDMILFHNYFKSRAVKSLLIVGAGRIAYYL
EF3030 CAIERDHQIIIPSGDMTVQDKDRIFVTGNRVDMILFHNYFKSRAVKSLLIVGAGRIAYYL
******************:*****************************************
TIGR4 LGILKDSRIDTKVIEINPEIASFFSEKFPNLYIVQGDGTAKDILLEESAQHYDAVATLTG
D39 LGILKDSRIDTKVIEINPEIASFFSEKFPNLYIVQGDGTAKDILLEESAQHYDAVATLTG
D39V LGILKDSRIDTKVIEINPEIASFFSEKFPNLYIVQGDGTAKDILLEESAQHYDAVATLTG
Hungary19A-6 LGILKDSRIDTKVIEINPEIASFFSEKFPNLYIVQGDGTAKDILLEESAQHYDAVATLTG
EF3030 LGILKDSRIDTKVIEINPEIASFFSEKFPNLYIVQGDGTAKDILLEESAQHYDAVATLTG
************************************************************
TIGR4 VDEENLITSMFLDRVGVQKNITKVNRTSLLEIINAPDFSSIITPKSIAVDTIMHFIRGRV
D39 VDEENLITSMFLDRVGVQKNITKVNRTSLLEIINAPDFSSIITPKSIAVDTIMHFIRGRV
D39V VDEENLITSMFLDRVGVQKNITKVNRTSLLEIINAPDFSSIITPKSIAVDTIMHFIRGRV
Hungary19A-6 VDEENLITSMFLDRVGVQKNITKVNRTSLLEIINAPDFSSIITPKSIAVDTIMHFIRGRV
EF3030 VDEENLITSMFLDRVGVQKNITKVNRTSLLEIINAPDFSSIITPKSIAVDTIMHFIRGRV
************************************************************
TIGR4 NAQYSDLQAMHHLANGQIETLQFHIKEANKMTAKPLSQLKLKKGVLIAAIIRKGKTIFPT
D39 NAQYSDLQAMHHLANGQIETLQFHIKEANKMTAKPLSQLKLKKGVLIAAIIRKGKTIFPT
D39V NAQYSDLQAMHHLANGQIETLQFHIKEANKMTAKPLSQLKLKKGVLIAAIIRKGKTIFPT
Hungary19A-6 NAQYSDLQAMHHLANGQIETLQFHIKEANKMTAKPLSQLKLKKEVLIAAIIRKGKTIFPT
EF3030 NAQYSDLQAMHHLANGQIETLQFHIKEANKMTAKPLSQLKLKKGVLIAAIIRKGKTIFPT
******************************************* ****************
TIGR4 GEDMLEVGDKLLVTTLLPNITKIYDLIAR
D39 GEDMLEVGDKLLVTTLLPNITKIYDLIAR
D39V GEDMLEVGDKLLVTTLLPNITKIYDLIAR
Hungary19A-6 GEDMLEVGDKLLVTTLLPNITKIYDLIAR
EF3030 GEDMLEVGDKLLVTTLLPNITKIYDLIAR
*****************************