PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001431000
• symbol^?: nusA
• synonym:
• description^?: transcription termination factor NusA

  descriptions from strain specific annotations:

  • transcription termination factor NusA
  • putative putative N utilization substance protein A
  • transcription elongation factor NusA
  • transcription termination/antitermination protein NusA
  • Transcription termination/antitermination
  • N utilization substance protein A
  • Transcription elongation factor
  • Transcription termination
  • Transcription termination protein NusA
• strand^?: +
• coordinates^?: 1825413..1826549
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS02715 (nusA)
(2)
D39:
SPD_RS02585 (nusA)
(2)
D39V:
SPV_RS02580 (nusA)
(19A)
Hungary19A-6:
SPH_RS03160 (nusA)
(19F)
EF3030:
EF3030_RS02620 (nusA)
(6B)^?
670-6B:
SP670_RS03075 (nusA)
(6A)
6A-10:
HKM25_RS02660 (nusA)
(5)
70585:
SP70585_RS03005 (nusA)
(19F)
A026:
T308_RS02650 (nusA)
(3)
A66:
A66_RS02495 (nusA)
(11A)
AP200:
SPAP_RS02700 (nusA)
(12F)
ASP0581:
EL334_RS02825 (nusA)
(19F)
ATCC 49619:
EL263_RS02760 (nusA)
(23F)
ATCC 700669:
SPN23F_RS02555 (nusA)
(19F)
BM6001:
ODS73_RS03055 (nusA)
(1)
BVJ1JL:
JN057_RS02755 (nusA)
(14)
CGSP14:
SPCG_RS02725 (nusA)
(19F)
G54:
SPG_RS02525 (nusA)
(1)
gamPNI0373:
HMPREF1038_RS02840 (nusA)
(3)
HU-OH:
EL271_RS02545 (nusA)
(19A)
Hu15:
SPNHU15_RS02865 (nusA)
(19A)
Hu17:
SPNHU17_RS02795 (nusA)
(1)
INV104:
INV104_RS02695 (nusA)
(14)
INV200:
SPNINV200_RS02595 (nusA)
(14)
JJA:
SPJ_RS02585 (nusA)
(19F)
MDRSPN001:
MDRSPN_RS07805 (nusA)
(1)
NCTC7465:
AT689_RS10955 (nusA)
(2)
NCTC7466:
DQM66_RS02585 (nusA)
(4)
NU83127:
EL277_RS02790 (nusA)
(3)
OXC141:
SPNOXC_RS02725 (nusA)
(1)
P1031:
SPP_RS02795 (nusA)
(2)
R6:
SPR_RS02435 (nusA)
(19A)
SP49:
BMJ42_RS03295 (nusA)
(1)
SPN032672:
SPN032672_RS08960 (nusA)
(3)
SPN034156:
SPN034156_RS08650 (nusA)
(3)
SPN034183:
SPN034183_RS02740 (nusA)
(3)
SPN994038:
SPN994038_RS02660 (nusA)
(3)
SPN994039:
SPN994039_RS02660 (nusA)
(3)
SPNA45:
SPNA45_RS08675 (nusA)
(19F)
ST556:
MYY_RS03130 (nusA)
(19F)
Taiwan19F-14:
SPT_RS02905 (nusA)
(19A)
TCH8431/19A:
HMPREF0837_RS04075 (nusA)
(4)
Xen35:
CXP32_RS02785 (nusA)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MSKEMLEAFRILEEDKGIKKEDIIDAVVESLRSAYRRRYGQSDSVAIDFNEKTGDFTVYT
  D39             MSKEMLEAFRILEEDKRIKKEDIIDAVVESLRSAYRRRYGQSDSVAIDFNEKTGDFTVYT
  D39V            MSKEMLEAFRILEEDKRIKKEDIIDAVVESLRSAYRRRYGQSDSVAIDFNEKTGDFTVYT
  Hungary19A-6    MSKEMLEAFRILEEDKGIKKEDIIDAVVESLRSAYRRRYGQSDSVAIDFNEKTGDFTVYT
  EF3030          MSKEMLEAFRILEEDKGIKKEDIIDAVVESLRSAYRRRYGQSDSVAIDFNEKTGDFTVYT
                  **************** *******************************************
  
  TIGR4           VREVVDEVFDSRLEISLKDALAINSAYELGDKIKFEEAPAEFGRVAAQSAKQTIMEKMRK
  D39             VREVVDEVFDSRLEISLKDALAINSAYELGDKIKFEEAPAEFGRVAAQSAKQTIMEKMRK
  D39V            VREVVDEVFDSRLEISLKDALAINSAYELGDKIKFEEAPAEFGRVAAQSAKQTIMEKMRK
  Hungary19A-6    VREVVDEVFDSRLEISLKDALAINSAYELGDKIKFEEAPAEFGRVAAQSAKQTIMEKMRK
  EF3030          VREVVDEVFDSRLEISLKDALAINSAYELGDKIKFEEAPAEFGRVAAQSAKQTIMEKMRK
                  ************************************************************
  
  TIGR4           QTRAITYNTYKEHEQEIMSGTVERFDNRFIYVNLGSIEAQLSKQDQIPGEVFASHDRIEV
  D39             QTRAITYNTYKEHEQEIMSGTVERFDNRFIYVNLGSIEAQLSKQDQIPGEVFASHDRIEV
  D39V            QTRAITYNTYKEHEQEIMSGTVERFDNRFIYVNLGSIEAQLSKQDQIPGEVFASHDRIEV
  Hungary19A-6    QTRAITYNTYKEHEQEIMSGTVERFDNRFIYVNLGSIEAQLSKQDQIPGEVFASHDRIEV
  EF3030          QTRAITYNTYKEHEQEIMSGTVERFDNRFIYVNLGSIEAQLSKQDQIPGEVFASHDRIEV
                  ************************************************************
  
  TIGR4           YVYKVEDNPRGVNVFVSRSHPEMIKRLMEQEIPEVYDGTVEIMSVAREAGDRTKVAVRSH
  D39             YVYKVEDNPRGVNVFVSRSHPEMIKRLMEQEIPEVYDGTVEIMSVAREAGDRTKVAVRSH
  D39V            YVYKVEDNPRGVNVFVSRSHPEMIKRLMEQEIPEVYDGTVEIMSVAREAGDRTKVAVRSH
  Hungary19A-6    YVYKVEDNPRGVNVFVSRSHPEMIKRLMEQEIPEVYDGTVEIMSVAREAGDRTKVAVRSH
  EF3030          YVYKVEDNPRGVNVFVSRSHPEMIKRLMEQEIPEVYDGTVEIMSVAREAGDRTKVAVRSH
                  ************************************************************
  
  TIGR4           NPNVDAIGTIVGRGGANIKKITSKFHPARYDAKNDRMVPIEENIDVIEWVADPAEFIYNA
  D39             NPNVDAIGTIVGRGGANIKKITSKFHPARYDAKNDRMVPIEENIDVIEWVADPAEFIYNA
  D39V            NPNVDAIGTIVGRGGANIKKITSKFHPARYDAKNDRMVPIEENIDVIEWVADPAEFIYNA
  Hungary19A-6    NPNVDAIGTIVGRGGANIKKITSKFHPARYDAKNDRMVPIEENIDVIEWVADPAEFIYNA
  EF3030          NPNVDAIGTIVGRGGANIKKITSKFHPARYDAKNDRMVPIEENIDVIEWVADPAEFIYNA
                  ************************************************************
  
  TIGR4           IAPAEVDQVIFDENDSKRALVVVPDNKLSLAIGRRGQNVRLAAHLTGYRIDIKSASEFEA
  D39             IAPAEVDQVIFDESDSKRALVVVPDNKLSLAIGRRGQNVRLAAHLTGYRIDIKSASEFEA
  D39V            IAPAEVDQVIFDESDSKRALVVVPDNKLSLAIGRRGQNVRLAAHLTGYRIDIKSASEFEA
  Hungary19A-6    IAPAEVDQVIFDENDSKRALVVVPDNKLSLAIGRRGQNVRLAAHLTGYRIDIKSASEFEA
  EF3030          IAPAEVDQVIFDENDSKRALVVVPDNKLSLAIGRRGQNVRLAAHLTGYRIDIKSASEFEA
                  *************.**********************************************
  
  TIGR4           MEDAASVELEVENDTVEE
  D39             MEDAASVELEVENDTVEE
  D39V            MEDAASVELEVENDTVEE
  Hungary19A-6    MEDAASVELEVENDTVEE
  EF3030          MEDAASVELEVENDTVEE
                  ******************