PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001450000
• symbol^?: valS
• synonym:
• description^?: valine--tRNA ligase

  descriptions from strain specific annotations:

  • valine--tRNA ligase
  • valyl-tRNA synthetase
• strand^?: +
• coordinates^?: 1843587..1846239
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS02790
(2)
D39:
SPD_RS02660
(2)
D39V:
SPV_RS02655
(19A)
Hungary19A-6:
SPH_RS03240
(19F)
EF3030:
EF3030_RS02695
(6B)^?
670-6B:
SP670_RS03145
(6A)
6A-10:
HKM25_RS02735
(5)
70585:
SP70585_RS03110
(19F)
A026:
T308_RS02730
(3)
A66:
A66_RS02570
(11A)
AP200:
SPAP_RS02770
(12F)
ASP0581:
EL334_RS02895
(19F)
ATCC 49619:
EL263_RS02835
(23F)
ATCC 700669:
SPN23F_RS02625
(19F)
BM6001:
ODS73_RS03130
(1)
BVJ1JL:
JN057_RS02835
(14)
CGSP14:
SPCG_RS02805
(19F)
G54:
SPG_RS02610
(1)
gamPNI0373:
HMPREF1038_RS02915
(3)
HU-OH:
EL271_RS02620
(19A)
Hu15:
SPNHU15_RS02935
(19A)
Hu17:
SPNHU17_RS02865
(1)
INV104:
INV104_RS02785
(14)
INV200:
SPNINV200_RS02675
(14)
JJA:
SPJ_RS02660
(19F)
MDRSPN001:
MDRSPN_RS07730
(1)
NCTC7465:
AT689_RS10885
(2)
NCTC7466:
DQM66_RS02660
(4)
NU83127:
EL277_RS02865
(3)
OXC141:
SPNOXC_RS02805
(1)
P1031:
SPP_RS02875
(2)
R6:
SPR_RS02515
(19A)
SP49:
BMJ42_RS03370
(1)
SPN032672:
SPN032672_RS09055
(3)
SPN034156:
SPN034156_RS08730
(3)
SPN034183:
SPN034183_RS02820
(3)
SPN994038:
SPN994038_RS02740
(3)
SPN994039:
SPN994039_RS02740
(3)
SPNA45:
SPNA45_RS08595
(19F)
ST556:
MYY_RS03205
(19F)
Taiwan19F-14:
SPT_RS02985
(19A)
TCH8431/19A:
HMPREF0837_RS04155
(4)
Xen35:
CXP32_RS02860

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MSKELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDT
  D39             MSKELSSKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDT
  D39V            MSKELSSKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDT
  Hungary19A-6    MSKELSSKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDT
  EF3030          MSKELSSKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDT
                  ******.*****************************************************
  
  TIGR4           TLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLRGEGITRYDLGRESFLTKVWEW
  D39             TLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLRGEGISRYDLGRESFLTKVWEW
  D39V            TLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLRGEGISRYDLGRESFLTKVWEW
  Hungary19A-6    TLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLRGEGISRYDLGRESFLTKVWEW
  EF3030          TLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLRGEGISRYDLGRESFLTKVWEW
                  *******************************************:****************
  
  TIGR4           KDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVNLYKKGWIYRGEFIINWDP
  D39             KDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDP
  D39V            KDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDP
  Hungary19A-6    KDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDP
  EF3030          KDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDP
                  *****************************************:******************
  
  TIGR4           AARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEVATTRPETMFGDVAVAVNPEDPRYK
  D39             AARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEVATTRPETMFGDVAIAVNPEDPRYK
  D39V            AARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEVATTRPETMFGDVAIAVNPEDPRYK
  Hungary19A-6    AARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEVATTRPETMFGDVAVAVNPEDPRYK
  EF3030          AARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEVATTRPETMFGDVAVAVNPEDPRYK
                  *************************************************:**********
  
  TIGR4           DLIGKNVILPIANKLIPIVGDEHADPELGTGVVKITPAHDPNDFLVGQRHNLPQVNVMND
  D39             DLIGKNVILPIANKLIPIVGDEHADPEFGTGVVKITPAHDPNDFLVGQRHNLPQVNIMND
  D39V            DLIGKNVILPIANKLIPIVGDEHADPEFGTGVVKITPAHDPNDFLVGQRHNLPQVNIMND
  Hungary19A-6    DLIGKNVILPIANKLIPIVGDEHADPEFGTGVVKITPAHDPNDFLVGQRHNLPQVNVMND
  EF3030          DLIGKNVILPIANKLIPIVGDEHADPEFGTGVVKITPAHDPNDFLVGQRHNLPQVNVMND
                  ***************************:****************************:***
  
  TIGR4           DGTMNELAFEFSGMDRFEARKAVVAKLEEIGALVKIEKRVHSVGHSERTGVVVEPRLSTQ
  D39             DGTMNELVFEFSGMDRFEARKAVVAKLEEIGALVKIEKRVHSVGHSERTGVVVEPRLSTQ
  D39V            DGTMNELVFEFSGMDRFEARKAVVAKLEEIGALVKIEKRVHSVGHSERTGVVVEPRLSTQ
  Hungary19A-6    DGTMNELAFEFSGMDRFEARKAVVAKLEEIGALVKIEKRVHSVGHSERTGVVVEPRLSTQ
  EF3030          DGTMNELAFEFSGMDRFEARKAVIAKLEEIGALVKIEKRVHSVGHSERTGVVVEPRLSTQ
                  *******.***************:************************************
  
  TIGR4           WFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYN
  D39             WFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYN
  D39V            WFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYN
  Hungary19A-6    WFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYN
  EF3030          WFVKMDQLAKNAIANQDTEDKVEFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYN
                  ************************************************************
  
  TIGR4           ADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTG
  D39             ADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTG
  D39V            ADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTG
  Hungary19A-6    ADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTG
  EF3030          ADGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPEVDSEDFKRYFPTSTLVTG
                  ************************************************************
  
  TIGR4           YDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGA
  D39             YDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGA
  D39V            YDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGA
  Hungary19A-6    YDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIDKYGT
  EF3030          YDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGA
                  ************************************:******************:***:
  
  TIGR4           DALRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLDVAHDNVTKV
  D39             DALRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNGGLTLDVAHDNVTKV
  D39V            DALRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNGGLTLDVAHDNVTKV
  Hungary19A-6    DSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNGGLTLDVAHDNVTKV
  EF3030          DALRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNGGLTLDVAHDNVTKV
                  *:******************************************* **************
  
  TIGR4           ATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVL
  D39             ATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVL
  D39V            ATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVL
  Hungary19A-6    ATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVL
  EF3030          ATGEAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVL
                  ************************************************************
  
  TIGR4           YSDNEDDKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQISEGSIVTAAYPTVNLAFED
  D39             YSDNEDDKVITRSVLLYTLDKILRLLHSIMPFVTEEIFGQYAEGSIVTAAYPTVNPAFED
  D39V            YSDNEDDKVITRSVLLYTLDKILRLLHSIMPFVTEEIFGQYAEGSIVTAAYPTVNPAFED
  Hungary19A-6    YSDNEDDKVITRSVLLYTLDKILRLLHPIMPFVTEEIFDQYAEGSIVTAAYPTVNPAFED
  EF3030          YSDNEDDKVITRSVLLYTLDKILRLLHSIMPFVTEEIFGQYAEGSIVTAAYPTVNPAFED
                  ***************************.**********.* :************* ****
  
  TIGR4           LAAHTGVESLKDLIRAVRNARAEVNVAPSKPITILVKTSDSDLEAFFNSNVNYIKRFTNP
  D39             LAAHTGVESLKDLIRAVRNARAEVNVAPSKPITILVKTSDSDLEAFFNSNVNYIKRFTNP
  D39V            LAAHTGVESLKDLIRAVRNARAEVNVAPSKPITILVKTSDSDLEAFFNSNVNYIKRFTNP
  Hungary19A-6    LAAHTGVESLKNLIRAVRNARAEVNVAPSKPITILVKTSDSDLEAFFNSNVNYIKRFTNP
  EF3030          LAAHTGVESLKDLIRAVRNARAEVNVAPSKPITILVKTSDSDLEAFFNSNVNYIKRFTNP
                  ***********:************************************************
  
  TIGR4           EHLEIASTIPAPELAMSSVITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKL
  D39             EHLEIASTIPAPELAMSSVITGAEIFLPLVDLLNVEEELARLEKELAKWQKELDMVGKKL
  D39V            EHLEIASTIPAPELAMSSVITGAEIFLPLVDLLNVEEELARLEKELAKWQKELDMVGKKL
  Hungary19A-6    EHLEIASTIPAPELAMSSVITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKL
  EF3030          EHLEIASTIPAPELAMSSVITGAEIFLPLVDLLNVEEELARLEKELAKWQKELDMVGKKL
                  *************************:***.************:*****************
  
  TIGR4           SNERFVANAKPEVVQKECDKQADYQAKYDATVARIDEMKKLVK
  D39             SNERFVANAKPEVVQKEKDKQADYQAKYDVTVARIDEMKKLVK
  D39V            SNERFVANAKPEVVQKEKDKQADYQAKYDVTVARIDEMKKLVK
  Hungary19A-6    SNERFVANAKPEVVQKEKDKQADYQAKYDVTVARIDEMKKLVK
  EF3030          SNERFVANAKPEVVQKEKDKQADYQAKYDATVARIDEMKKLVK
                  ***************** ***********.*************