PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001484000
• symbol^?: pnp
• synonym:
• description^?: polyribonucleotide nucleotidyltransferase

  descriptions from strain specific annotations:

  • polyribonucleotide nucleotidyltransferase
  • polyribonucleotide nucleotidyltransferase (Polynucleotidephosphorylase) (PNPase) (Vegetative protein 15) (VEG15)
  • polynucleotide phosphorylase
  • pseudogene
• strand^?: +
• coordinates^?: 1901996..1904209
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS02910 (pnp)
(2)
D39:
SPD_RS02755 (pnp)
(2)
D39V:
SPV_RS02750 (pnp)
(19A)
Hungary19A-6:
SPH_RS03335 (pnp)
(19F)
EF3030:
EF3030_RS02785 (pnp)
(6B)^?
670-6B:
SP670_RS03255 (pnp)
(6A)
6A-10:
HKM25_RS02825 (pnp)
(5)
70585:
SP70585_RS03215 (pnp)
(19F)
A026:
T308_RS02825 (pnp)
(3)
A66:
A66_RS02680 (pnp)
(11A)
AP200:
SPAP_RS02875 (pnp)
(12F)
ASP0581:
EL334_RS02990 (pnp)
(19F)
ATCC 49619:
EL263_RS02930 (pnp)
(23F)
ATCC 700669:
SPN23F_RS02720 (pnp)
(19F)
BM6001:
ODS73_RS03215 (pnp)
(1)
BVJ1JL:
JN057_RS02915 (pnp)
(14)
CGSP14:
SPCG_RS02920 (pnp)
(19F)
G54:
SPG_RS02705 (pnp)
(1)
gamPNI0373:
HMPREF1038_RS03030 (pnp)
(3)
HU-OH:
EL271_RS02710 (pnp)
(19A)
Hu15:
SPNHU15_RS03015 (pnp)
(19A)
Hu17:
SPNHU17_RS02945 (pnp)
(1)
INV104:
INV104_RS02880 (pnp)
(14)
INV200:
SPNINV200_RS02790 (pnp)
(14)
JJA:
SPJ_RS02725 (pnp)
(19F)
MDRSPN001:
MDRSPN_RS07635 (pnp)
(1)
NCTC7465:
AT689_RS10775 (pnp)
(2)
NCTC7466:
DQM66_RS02755 (pnp)
(4)
NU83127:
EL277_RS02975 (pnp)
(3)
OXC141:
SPNOXC_RS02910 (pnp)
(1)
P1031:
SPP_RS02990 (pnp)
(2)
R6:
SPR_RS02615 (pnp)
(19A)
SP49:
BMJ42_RS03465 (pnp)
(1)
SPN032672:
SPN032672_RS09150 (pnp)
(3)
SPN034156:
SPN034156_RS08835 (pnp)
(3)
SPN034183:
SPN034183_RS02925 (pnp)
(3)
SPN994038:
SPN994038_RS02845 (pnp)
(3)
SPN994039:
SPN994039_RS02845 (pnp)
(3)
SPNA45:
SPNA45_RS08470 (pnp)
(19F)
ST556:
MYY_RS03300 (pnp)
(19F)
Taiwan19F-14:
SPT_RS03080 (pnp)
(19A)
TCH8431/19A:
HMPREF0837_RS04250 (pnp)
(4)
Xen35:
CXP32_RS02965 (pnp)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MAKQVFQTTFAGRELIVETGQVAKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVN
  D39             MAKQVFQTTFAGRELIVETGQVAKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVN
  D39V            MAKQVFQTTFAGRELIVETGQVAKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVN
  Hungary19A-6    MAKQVFQTTFAGRELIVETGQVAKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVN
  EF3030          MAKQVFQTTFAGRELIVETGQVAKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVN
                  ************************************************************
  
  TIGR4           YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
  D39             YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
  D39V            YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
  Hungary19A-6    YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
  EF3030          YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
                  ************************************************************
  
  TIGR4           NASAPMAAMFGSSLALSISDIPFDGPIAGVQVGYVDGQIIINPSQEQAEQSLLELTVAGT
  D39             NASAPMAAMFGSSLALSISDIPFDGPIAGVQVGYVDGQIIINPSQEQAEQSLLELTVAGT
  D39V            NASAPMAAMFGSSLALSISDIPFDGPIAGVQVGYVDGQIIINPSQEQAEQSLLELTVAGT
  Hungary19A-6    NASAPMAAMFGSSLALSISDIPFDGPIAGVQVGYVDGQIIINPSQEQAEQSLLELTVAGT
  EF3030          NASAPMAAMFGSSLALSISDIPFDGPIAGVQVGYVDGQIIINPSQEQAEQSLLELTVAGT
                  ************************************************************
  
  TIGR4           KHAINMVESGAKELSEEIMLEALLKGHEAVKELIAFQEEIVAAVGKEKAEVELLHVDAEL
  D39             KHAINMVESGAKELSEEIMLEALLKGHEAVKELIAFQEEIVAAVGKEKAEVELLHVDAEL
  D39V            KHAINMVESGAKELSEEIMLEALLKGHEAVKELIAFQEEIVAAVGKEKAEVELLHVDAEL
  Hungary19A-6    KHAINMVESGAKELSEEIMLEALLKGHEAVKELIAFQEEIVAAVGKEKAEVELLHVDADL
  EF3030          KHAINMVESGAKELSEEIMLEALLKGHEAVKELIAFQEEIVAAVGKEKAEVELLHVDAEL
                  **********************************************************:*
  
  TIGR4           QAEIIAAYNSDLQKAVQVEEKLAREAATQVVKDQVTAVYEEKYADHEEFDRIMRDVAEIL
  D39             QAEIIAAYNSDLQKAVQVEEKLAREAATQAVKDQVTAVYEEKYANHEEFDRIMRDVAEIL
  D39V            QAEIIAAYNSDLQKAVQVEEKLAREAATQAVKDQVTAVYEEKYANHEEFDRIMRDVAEIL
  Hungary19A-6    QAEIIAAYNSDLQKAVQVEEKLAREAATQTVKDQVIAVYEEKYADHEEFDRIMRDVAEIL
  EF3030          QAEIIAAYNSDLQKAVQVEEKLAREAATQVVKDQVTAVYEEKYADHEEFDRIMRDVAEIL
                  *****************************.***** ********:***************
  
  TIGR4           EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAVVDFLPRVHGSGLFTRGQTQALSVLTLA
  D39             EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAVVDFLPRVHGSGLFTRGQTQALSVLTLA
  D39V            EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAVVDFLPRVHGSGLFTRGQTQALSVLTLA
  Hungary19A-6    EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAVVDFLPRVHGSGLFTRGQTQALSVLTLA
  EF3030          EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAVVDFLPRVHGSGLFTRGQTQALSVLTLA
                  ************************************************************
  
  TIGR4           PMGETQIIDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
  D39             PMGETQIIDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
  D39V            PMGETQIIDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
  Hungary19A-6    PMGETQIIDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
  EF3030          PMGETQIIDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
                  ************************************************************
  
  TIGR4           LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTV
  D39             LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTV
  D39V            LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTV
  Hungary19A-6    LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTV
  EF3030          LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTV
                  ************************************************************
  
  TIGR4           LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIQGITAEILTEALAQAKKARFEILDVI
  D39             LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIQGITAEILTEALAQAKKARFEILDVI
  D39V            LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIQGITAEILTEALAQAKKARFEILDVI
  Hungary19A-6    LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIQGITAEILTEALAQAKKARFEILDVI
  EF3030          LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIQGITAEILTEALAQAKKARFEILDVI
                  ************************************************************
  
  TIGR4           EATIPEVRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
  D39             EATIPEVRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
  D39V            EATIPEVRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
  Hungary19A-6    EATIPEVRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
  EF3030          EATIPEVRLELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
                  ******** ***************************************************
  
  TIGR4           YSSDQDAINRAKEIIAGLVREAKVDEVYRAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
  D39             YSSDQDAINRAKEIIAGLVREAKVDEVYRAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
  D39V            YSSDQDAINRAKEIIAGLVREAKVDEVYRAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
  Hungary19A-6    YSSDQDAINRAKEIIAGLVREAKVDEVYRAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
  EF3030          YSSDQDAINRAKEIIAGLVREAKVDEVYRAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
                  ************************************************************
  
  TIGR4           RTNRVEDLVEIGDEVDVKVIKIDEKGRIDASMKALLPRPPKPEHDEKGEKSERPHRPRHQ
  D39             RTNRVEDLVEIGDEVDVKVIKIDEKGRIDASMKALLPRPPKPEHDEKGEKSERPHRPRHQ
  D39V            RTNRVEDLVEIGDEVDVKVIKIDEKGRIDASMKALLPRPPKPEHDEKGEKSERPHRPRHQ
  Hungary19A-6    RTNNVEDLVAIGDEVDVKVIKIDEKGRVDASMKALLPRPPKPERDEKGEKSERPYRPRHH
  EF3030          RTNRVEDLVEIGDEVDVKVIKIDEKGRIDASMKALLPRPPKPEHDEKGEKSERPHRPRHH
                  ***.***** *****************:***************:**********:****:
  
  TIGR4           KDYKPKKEFTETSKDSE
  D39             KDYKPKKEFTETPKDSE
  D39V            KDYKPKKEFTETPKDSE
  Hungary19A-6    KDHKPKKEITETPKDSE
  EF3030          KDHKPKKEFTETPKDSE
                  **:*****:***.****