PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001496000
• symbol^?: vex3
• synonym:
• description^?: ABC transporter permease subunit Vex3

  descriptions from strain specific annotations:

  • ABC transporter permease subunit Vex3
  • ABC transporter, permease protein
  • ABC transporter membrane-spanning permease - Pep export
  • peptide ABC transporter permease
  • ABC transporter permease
  • transmembrane protein Vexp3
  • ABC transporter, transmembrane protein Vexp3
  • ABC transporter%2C transmembrane protein Vexp3
  • ABC transporter membrane-spanning permease, Pep export, Vex3
  • ABC-type antimicrobial peptide transport system, permease component
  • efflux ABC transporter, permease protein
  • macB-like periplasmic core domain protein
  • Peptide ABC transporter membrane-spanning permease Vex3
• strand^?: +
• coordinates^?: 1914623..1916002
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS02960 (vex3)
(2)
D39:
SPD_RS02805 (vex3)
(2)
D39V:
SPV_RS02800 (vex3)
(19A)
Hungary19A-6:
SPH_RS03385 (vex3)
(19F)
EF3030:
EF3030_RS02835 (vex3)
(6B)^?
670-6B:
SP670_RS03305 (vex3)
(6A)
6A-10:
HKM25_RS02880 (vex3)
(5)
70585:
SP70585_RS03265 (vex3)
(19F)
A026:
T308_RS02875 (vex3)
(3)
A66:
A66_RS02730 (vex3)
(11A)
AP200:
SPAP_RS02925 (vex3)
(12F)
ASP0581:
EL334_RS03040 (vex3)
(19F)
ATCC 49619:
EL263_RS02980 (vex3)
(23F)
ATCC 700669:
SPN23F_RS02775 (vex3)
(19F)
BM6001:
ODS73_RS03265 (vex3)
(1)
BVJ1JL:
JN057_RS02965 (vex3)
(14)
CGSP14:
SPCG_RS02970 (vex3)
(19F)
G54:
SPG_RS02755 (vex3)
(1)
gamPNI0373:
HMPREF1038_RS03080 (vex3)
(3)
HU-OH:
EL271_RS02760 (vex3)
(19A)
Hu15:
SPNHU15_RS03065 (vex3)
(19A)
Hu17:
SPNHU17_RS02995 (vex3)
(1)
INV104:
INV104_RS02945 (vex3)
(14)
INV200:
SPNINV200_RS02840 (vex3)
(14)
JJA:
SPJ_RS02780 (vex3)
(19F)
MDRSPN001:
MDRSPN_RS07585 (vex3)
(1)
NCTC7465:
AT689_RS10725 (vex3)
(2)
NCTC7466:
DQM66_RS02805 (vex3)
(4)
NU83127:
EL277_RS03025 (vex3)
(3)
OXC141:
SPNOXC_RS02960 (vex3)
(1)
P1031:
SPP_RS03040 (vex3)
(2)
R6:
SPR_RS02670 (vex3)
(19A)
SP49:
BMJ42_RS03520 (vex3)
(1)
SPN032672:
SPN032672_RS09215 (vex3)
(3)
SPN034156:
SPN034156_RS08885 (vex3)
(3)
SPN034183:
SPN034183_RS02975 (vex3)
(3)
SPN994038:
SPN994038_RS02895 (vex3)
(3)
SPN994039:
SPN994039_RS02895 (vex3)
(3)
SPNA45:
SPNA45_RS08420 (vex3)
(19F)
ST556:
MYY_RS03350 (vex3)
(19F)
Taiwan19F-14:
SPT_RS03130 (vex3)
(19A)
TCH8431/19A:
HMPREF0837_RS04300 (vex3)
(4)
Xen35:
CXP32_RS03015 (vex3)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MLHNAFAYVTRKFFKSIVIFLIILLMASLSLVGLSIKGATAKASQETFKNITNSFSMQIN
  D39             MLHNAFAYVTRKFFKSIVIFLIILLMASLSLVGLSIKGATAKASQETFKNITNSFSMQIN
  D39V            MLHNAFAYVTRKFFKSIVIFLIILLMASLSLVGLSIKGATAKASQETFKNITNSFSMQIN
  Hungary19A-6    MLHNAFAYVTRKFFKSIVIFLIILLMASLSLVGLSIKGATAKASQETFKNITNSFSMQIN
  EF3030          MLHNAFAYVTRKFFKSIVIFLIILLMASLSLVGLSIKGATAKASQETFKNITNSFSMQIN
                  ************************************************************
  
  TIGR4           RRVNQGTPRGAGNIKGEDIKKITENKAIESYVKRINAIGDLTGYDLIETPETKKNLTADR
  D39             RRVNQGTPRGAGNIKGEDIKKITENKAIESYVKRINAIGDLTGYDLIETPETKKNLTADR
  D39V            RRVNQGTPRGAGNIKGEDIKKITENKAIESYVKRINAIGDLTGYDLIETPETKKNLTADR
  Hungary19A-6    RRVNQGTPRGAGNIKGEDIKKITENKAIESYVKRINAIGDLTGYDLIETPETKKNLTADR
  EF3030          RRVNQGTPRGAGNIKGEDIKKITENKAIESYVKRINAIGDLTGYDLIETPETKKNLTADR
                  ************************************************************
  
  TIGR4           AKRFGSSLMITGVNDSSKEDKFVSGSYKLVEGEHLTNDDKDKILLHKDLAAKHGWKVGDK
  D39             AKRFGSSLMITGVNDSSKEDKFVSGSYKLVEGEHLTNDDKDKILLHKDLAAKHGWKVGDK
  D39V            AKRFGSSLMITGVNDSSKEDKFVSGSYKLVEGEHLTNDDKDKILLHKDLAAKHGWKVGDK
  Hungary19A-6    AKRFGSSLMITGVNDSSKEDKFVSGSYKLVEGEHLTNDDKDKILLHKDLAAKHGWKVGDK
  EF3030          AKRFGSSLMITGVNDSSKEDKFVSGSYKLVEGEHLTNDDKDKILLHKDLAAKHGWKVGDK
                  ************************************************************
  
  TIGR4           VKLDSNIYDADNEKGAKETVEVTIKGLFDGHNKSAVTYSQELYENTAITDIHTAAKLYGY
  D39             VKLDSNIYDADNEKGAKETVEVTIKGLFDGHNKSAVTYSQELYENTAITDIHTAAKLYGY
  D39V            VKLDSNIYDADNEKGAKETVEVTIKGLFDGHNKSAVTYSQELYENTAITDIHTAAKLYGY
  Hungary19A-6    VKLDSNIYDADNEKGAKETVEVTIKGLFDGHNKSAVTYSQELYENTAITDIHTAAKLYGY
  EF3030          VKLDSNIYDADNEKGAKETVEVTIKGLFDGHNKSAVTYSQELYENTAITDIHTAAKLYGY
                  ************************************************************
  
  TIGR4           TEDTAIYGDATFFVTADKNLDDVMKELNGISGINWKSYTLVKSSSNYPALEQSISGMYKM
  D39             TEDTAIYGDATFFVTADKNLDDVMKELNGISGINWKSYTLVKSSSNYPALEQSISGMYKM
  D39V            TEDTAIYGDATFFVTADKNLDDVMKELNGISGINWKSYTLVKSSSNYPALEQSISGMYKM
  Hungary19A-6    TEDTAIYGDATFFVTADKNLDDVMKELNGISGINWKSYTLVKSSSNYPALEQSISGMYKM
  EF3030          TEDTAIYGDATFFVTADKNLDDVMKELNGISGINWKSYTLVKSSSNYPALEQSISGMYKM
                  ************************************************************
  
  TIGR4           ANLLFWGSLSFSVLLLALLLSLWINARRKEVGILLSIGLKQASILGQFITESILIAIPAL
  D39             ANLLFWGSLSFSVLLLALLLSLWINARRKEVGILLSIGLKQASILGQFITESILIAIPAL
  D39V            ANLLFWGSLSFSVLLLALLLSLWINARRKEVGILLSIGLKQASILGQFITESILIAIPAL
  Hungary19A-6    ANLLFWGSLSFSVLLLALLLSLWINARRKEVGILLSIGLKQASILGQFITESILIAIPAL
  EF3030          ANLLFWGSLSFSVLLLALLLSLWINARRKEVGILLSIGLKQASILGQFIIESILIAIPAL
                  ************************************************* **********
  
  TIGR4           VSAYFLANYTARAIGNTVLANVTSGVAKQASKAAQASNLGGGAEVDGFSKTLSSLDISIQ
  D39             VSAYFLANYTARAIGNTVLANVTSGVAKQASKAAQASNLGGGAEVDGFSKTLSSLDISIQ
  D39V            VSAYFLANYTARAIGNTVLANVTSGVAKQASKAAQASNLGGGAEVDGFSKTLSSLDISIQ
  Hungary19A-6    VSAYFLANYTARAIGNTVLANVTSGVAKQASKAAQASNLGGGAEVDGFSKTLSSLDISIQ
  EF3030          VSAYFLANYTARAIGNTVLANVTSGVAKQASKAAQASNLGGGAEVDGFSKTLSSLDISIQ
                  ************************************************************
  
  TIGR4           TSDFIIIFVLALVLVVLVMALASSNLLRKQPKELLLDGE
  D39             TSDFIIIFVLALVLVVLVMALASSNLLRKQPKELLLDGE
  D39V            TSDFIIIFVLALVLVVLVMALASSNLLRKQPKELLLDGE
  Hungary19A-6    TSDFIIIFVLALVLVVLVMALASSNLLRKQPKELLLDGE
  EF3030          TSDFIIIFVLALVLVVLVMALASSNLLRKQPKELLLDGE
                  ***************************************