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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001517000
- symbol?: metF
- synonym:
- description?: methylenetetrahydrofolate reductase [NAD(P)H]
- methylenetetrahydrofolate reductase [NAD(P)H]
- 5,10-methylenetetrahydrofolate reductase
- methylenetetrahydrofolate reductase
- methylenetetrahydrofolate reductase (NAD(P)H)
- 5,10-methylenetetrahydrofolate reductase, putative
- putative 5,10-methylenetetrahydrofolate reductase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1858523..1859389
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
SPN034156_RS08830 (metF)
SPN034183:
SPN034183_RS02920 (metF)
SPN994038:
SPN994038_RS02840 (metF)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSRQTPSLSFEVFPPNPAVGNDNIISALQDMQELAPHFISVTASNNKFNIKETTVRLADF
D39 MSRQTPSLSFEVFPPTPAVGNDNIISALQDMQELAPHFISVTASNNKFNIKETTVRLADF
D39V MSRQTPSLSFEVFPPTPAVGNDNIISALQDMQELAPHFISVTASNNKFNIKETTVRLADF
Hungary19A-6 MSRQTPSLSFEVFPPNPAVGNGNIISALQDMQELAPHFISVTASNNKFNIKETTVRLADF
EF3030 MSRQTPSLSFEVFPPNPAVGNGNIISALQYMQELTPYFISVTASNNKFNIKETTVRLADF
***************.*****.******* ****:*:***********************
TIGR4 IQNDLAIPTIAHLPAIYLTKDKVAETIADLDKVGVQKILALRGDIIPDVEPQKDFRYATD
D39 IQNDLAIPTIAHLPAIYLTKDKVAETIADLDKVGVQKILALRGDIIPDVEPQKDFRYATD
D39V IQNDLAIPTIAHLPAIYLTKDKVAETIADLDKVGVQKILALRGDIIPDVEPQKDFRYATD
Hungary19A-6 IQNDLAIPTIAHLPAIYLTKDKVAETIADLDKVGVQKILALRGDIIPDVEPQKDFRYATD
EF3030 IQNDLAIPTIAHLPAIYLTKDKVAETIADLDKVGVQKILALRGDIIPDVEPQKDFRYATD
************************************************************
TIGR4 LIEFIKEQTPHFDIIGACYPEGHPDSPNQISDIQNLKKKVDAGCSSLVTQLFFDNERFYD
D39 LIELIKERAPHFDIIGACYPEGHPDSPNQISDIQNLKKKVDAGCSSLVTQLFFDNERFYD
D39V LIELIKERAPHFDIIGACYPEGHPDSPNQISDIQNLKKKVDAGCSSLVTQLFFDNERFYD
Hungary19A-6 LIEFIKEQTPHFDIIGACYPEGHPDSPNQISDIQNLKKKVDAGCSSLVTQLFFDNERFYD
EF3030 LIEFIKEQTPHFDIIGACYPEGHPDSPNQISDIQNLKKKVDAGCSSLVTQLFFDNERFYD
***:***::***************************************************
TIGR4 FQDKCILAGIDVPIHAGIMPILNRNQALRLLKTCENIHLPRKFKAILDKYEHDPESLRAA
D39 FQDKCILAGIDVPIHAGIMPILNRNQALRLLKTCENIHLPRKFKAILDKYEHDPESLRAA
D39V FQDKCILAGIDVPIHAGIMPILNRNQALRLLKTCENIHLPRKFKAILDKYEHDPESLRAA
Hungary19A-6 FQDKCILAGIDVPIHAGIMPILNRNQALRLLKTCENIHLPRKFKAILDKYEHDPESLRAA
EF3030 FQDKCILAGIDVPIHAGIMPILNRNQALRLLKTCENIHLPRKFKAILDKYEHDPESLRAA
************************************************************
TIGR4 GLAYAVDQIVDLVTQDVAGVHLYTMNNADTAKYIHQATHALFNHQSLG
D39 GLAYAVDQIVDLVTQDIAGVHLYTMNNADTAKYIHQATHALFNHQSLG
D39V GLAYAVDQIVDLVTQDIAGVHLYTMNNADTAKYIHQATHALFNHQSLG
Hungary19A-6 GLAYAVDQIVDLVTQDVAGVHLYTMNNADTAKYIHQATHALFNHQSLG
EF3030 GLAYAVDQIVDLVTQDVAGVHLYTMNNADTAKYIHQATHALFNHQSLG
****************:*******************************